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Basic Information
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CGSNL Gene Symbol
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NAC90
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Gene Symbol Synonym
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OsSWN7, SWN7, ONAC090, ONAC90, VND6, VND4/5/6, OsVND6, OsVND4/5/6, DLN155, OsDLN155
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CGSNL Gene Name
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NAC DOMAIN-CONTAINING PROTEIN 90
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Gene Name Synonym
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secondary wall NAC transcription factor 7, secondary wall-associated NAC 7, SECONDARY WALL NAC DOMAIN PROTEIN 7, NAC domain-containing protein 090, NAC domain-containing protein 90, VASCULAR- RELATED NAC-DOMAIN 6, DLN repressor 155, DLN motif protein 155
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Protein Name
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NAC DOMAIN-CONTAINING PROTEIN 90
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Allele
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vnd6, vnd6-1, vnd6-2
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Chromosome No.
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6
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Explanation
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JN634076. a homolog of AtVND6. GO:1901348: positive regulation of secondary cell wall biogenesis. TO:0000993: cellulose content.
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Trait Class
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Vegetative organ - Culm
Tolerance and resistance - Stress tolerance
Character as QTL - Plant growth activity
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK069423
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MSU ID
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LOC_Os06g01480.1
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RAP ID
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Os06g0104200
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Cao S., Wang Y., Gao Y., Xu R., Ma J., Xu Z., Shang-Guan K., Zhang B., Zhou Y.
Mol Plant 2023 16(6) 999-1015
The RLCK-VND6 module coordinates secondary cell wall formation and adaptive growth in rice.
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Ke S., Luan X., Liang J., Hung Y.H., Hsieh T.F., Zhang X.Q.
Plant Mol. Biol. 2019 100(1-2) 151-161
Rice OsPEX1, an extensin-like protein, affects lignin biosynthesis and plant growth.
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Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019 20(7)
Analysis of Rice Proteins with DLN repressor Motif/S.
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Yoshida K., Sakamoto S., Kawai T., Kobayashi Y., Sato K., Ichinose Y., Yaoi K., Akiyoshi-Endo M., Sato H., Takamizo T., Ohme-Takagi M., Mitsuda N.
Front Plant Sci 2013 4 383
Engineering the Oryza sativa cell wall with rice NAC transcription factors regulating secondary wall formation.
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Madana M R Ambavaram, Krishnan A., Kurniawan R Trijatmiko, Pereira A.
Plant Physiol. 2011 155(2) 916-31
Coordinated activation of cellulose and repression of lignin biosynthesis pathways in rice.
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Zhong,R., Lee,C., McCarthy,R.L., Reeves,C.K., Jones,E.G. and Ye,Z.H.
Plant Cell Physiol. 2011
Transcriptional activation of secondary wall biosynthesis by rice and maize NAC and MYB transcription factors
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Shen H., Yin Y., Chen F., Xu Y., Richard A. Dixon
Bioenerg. Res. 2009 2 217–232
A Bioinformatic Analysis of NAC Genes for Plant Cell Wall Development in Relation to Lignocellulosic Bioenergy Production
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Fang Y., You J., Xie K., Xie W., Xiong L.
Mol. Genet. Genomics 2008 280(6) 547-63
Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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DNA binding( GO:0003677 )
regulation of transcription, DNA-dependent( GO:0006355 )
cell wall thickening( GO:0052386 )
vascular transport( GO:0010232 )
regulation of cell growth( GO:0001558 )
abscisic acid mediated signaling( GO:0009738 )
response to abscisic acid stimulus( GO:0009737 )
response to mechanical stimulus( GO:0009612 )
nucleus( GO:0005634 )
regulation of metaxylem development( GO:0090060 )
regulation of growth( GO:0040008 )
secondary cell wall biogenesis( GO:0009834 )
internode patterning( GO:0080006 )
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Trait Ontology
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stem strength( TO:0000051 )
abscisic acid sensitivity( TO:0000615 )
plant height( TO:0000207 )
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Plant Ontology
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xylem vessel( PO:0025417 )
stem elongation stage( PO:0007089 )
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Related Strains
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Phenotype images
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-
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Last updated
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Feb 18, 2025
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Update info.