Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol RPS16
Gene Symbol Synonym rps16
CGSNL Gene Name RIBOSOMAL PROTEIN S16
Gene Name Synonym ribosomal protein S16
Protein Name RIBOSOMAL PROTEIN S16
Allele
Chromosome No. Pt
Explanation LOC_Osp1g00130. X15901: CAA34009 (Japonica Group chloroplast genome). P12151. FJ908401-FJ908415 (wild rice species). EU434222, EU434223 (O. rufipogon and O.sativa intron). JN861109, JN861110 (Indica Group chloroplast genome). AP006728 (Oryza nivara chloroplast genome).
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Osp1g00130
RAP ID -
Links Organelle Genome
INSD Accession List
(Test version) 		-
Map
Locate(cM)
References
Lv J., Shang L., Chen Y., Han Y., Yang X., Xie S., Bai W., Hu M., Wu H., Lei K., Ya'nan Yang, Ge S., Hai Phuong Trinh, Zhang Y., Guo L., Wang Z.
Rice (N Y) 2020  13(1)  25
OsSLC1 Encodes a Pentatricopeptide Repeat Protein Essential for Early Chloroplast Development and Seedling Survival.
Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012  7 (7)  E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
Tang,L., Zou,X.H., Achoundong,G., Potgieter,C., Second,G., Zhang,D.Y. and Ge,S.
Mol. Phylogenet. Evol. 2010  54(1)  266-277
Phylogeny and biogeography of the rice tribe (Oryzeae): evidence from combined analysis of 20 chloroplast fragments
Sungkaew,S., Stapleton,C.M., Salamin,N. and Hodkinson,T.R.
J. Plant Res. 2009  122(1)  95-108
Non-monophyly of the woody bamboos (Bambuseae; Poaceae): a multi-gene region phylogenetic analysis of Bambusoideae s.s
Masood,M.S., Nishikawa,T., Fukuoka,S., Njenga,P.K., Tsudzuki,T. and Kadowaki,K.
Gene 2004  340(1)  133-139
The complete nucleotide sequence of wild rice (Oryza nivara) chloroplast genome: first genome wide comparative sequence analysis of wild and cultivated rice
Shimada,H. and Sugiura,M.
Nucleic Acids Res. 1991  19(5)  983-995
Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes
Hiratsuka,J., Shimada,H., Whittier,R., Ishibashi,T., Sakamoto,M., Mori,M., Kondo,C., Honji,Y., Sun,C.R. and Meng,B.Y.
Mol. Gen. Genet. 1989  217(2-3)  185-194
The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of cereals
DB Reference
Gramene ID -
Ontologies
Gene Ontology structural constituent of ribosome( GO:0003735 )
plastid( GO:0009536 )
translation( GO:0006412 )
ribosome( GO:0005840 )
chloroplast( GO:0009507 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jul 17, 2020

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