Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol RPS12
Gene Symbol Synonym rps12
CGSNL Gene Name RIBOSOMAL PROTEIN S12
Gene Name Synonym ribosomal protein S12
Protein Name RIBOSOMAL PROTEIN S12
Allele
Chromosome No. Pt
Explanation X15901: CAA33929 (Japonica Group chloroplast genome). P12149. JN861109, JN861110 (Indica Group chloroplast genome). AP006728 (Oryza nivara chloroplast genome).
Trait Class Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links Organelle Genome
INSD Accession List
(Test version) 		-
Map
Locate(cM)
References
Zhang Q., Shen L., Ren D., Hu J., Zhu L., Gao Z., Zhang G., Guo L., Zeng D., Qian Q.
Biomolecules 2020  10(2) 
Characterization of the CRM Gene Family and Elucidating the Function of OsCFM2 in Rice.
Liu X., Lan J., Huang Y., Cao P., Zhou C., Ren Y., He N., Liu S., Tian Y., Nguyen T., Jiang L., Wan J.
J. Exp. Bot. 2018  69(16)  3949-3961
WSL5, a pentatricopeptide repeat protein, is essential for chloroplast biogenesis in rice under cold stress.
Wang Y., Ren Y., Zhou K., Liu L., Wang J., Xu Y., Zhang H., Zhang L., Feng Z., Wang L., Ma W., Wang Y., Guo X., Zhang X., Lei C., Cheng Z., Wan J.
Front Plant Sci 2017  8  1116
WHITE STRIPE LEAF4 Encodes a Novel P-Type PPR Protein Required for Chloroplast Biogenesis during Early Leaf Development.
Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012  7 (7)  E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
Masood,M.S., Nishikawa,T., Fukuoka,S., Njenga,P.K., Tsudzuki,T. and Kadowaki,K.
Gene 2004  340(1)  133-139
The complete nucleotide sequence of wild rice (Oryza nivara) chloroplast genome: first genome wide comparative sequence analysis of wild and cultivated rice
Shimada,H. and Sugiura,M.
Nucleic Acids Res. 1991  19(5)  983-995
Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes
Hiratsuka,J., Shimada,H., Whittier,R., Ishibashi,T., Sakamoto,M., Mori,M., Kondo,C., Honji,Y., Sun,C.R. and Meng,B.Y.
Mol. Gen. Genet. 1989  217(2-3)  185-194
The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of cereals
Kikuchi,S., Takaiwa,F. and Oono,K.
Mol. Gen. Genet. 1987  210(3)  373-380
Variable copy number DNA sequences in rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology translation( GO:0006412 )
chloroplast( GO:0009507 )
structural constituent of ribosome( GO:0003735 )
small ribosomal subunit( GO:0015935 )
rRNA binding( GO:0019843 )
plastid( GO:0009536 )
Trait Ontology -
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Jul 10, 2020

/rice/oryzabase