Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol HIP1
Gene Symbol Synonym OsHIP1, HAF1, OsHAF1, OsRING275, RING275, OsE3IDP45-1, E3IDP45-1, OsE3IDP45-2, E3IDP45-2, OsC3HC4_048, C3HC4_048
CGSNL Gene Name HAL3-INTERACTING PROTEIN 1
Gene Name Synonym OsHAL3-interacting protein 1, Heading date Associated Factor 1, RING-type E3 ubiquitin ligase 275, C3HC4-type RING zinc finger protein 048
Protein Name HAL3-INTERACTING PROTEIN 1
Allele haf1
Chromosome No. 4
Explanation Q7XTV7. a protein with a RING-finger motif with similarity to E3 ligase. RING Finger Protein (OsRFP). GO:0061630: ubiquitin protein ligase activity.
Trait Class Biochemical character
Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK067751
AK071468
MSU ID LOC_Os04g55510.1
RAP ID Os04g0648800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Chen K., Wang S., Xu X., Zheng X., Wu H., Huang L., Dai L., Zhan C., Zeng D., Fu L.
Plants (Basel) 2025  14(15) 
Genome-Wide Identification, Characterization, and Comparison of <i>C3HC4</i> Family Genes in salt tolerance Between Barley and Rice.
Luo M., Zhu S., Dang H., Wen Q., Niu R., Long J., Wang Z., Tong Y., Ning Y., Yuan M., Xu G.
Nat Commun 2025  16(1)  1159
Genetically-encoded targeted protein degradation technology to remove endogenous condensation-prone proteins and improve crop performance.
Molla K.A.
Plant Cell 2023  35(10)  3627-3628
From the archives: Nuclear import of pathogenic noncoding RNAs, ubiquitination and the control of heading date in rice, and the use of ribozymes to modulate gene expression.
Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022  23(1)  154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
Zhu C., Peng Q., Fu D., Zhuang D., Yu Y., Duan M., Xie W., Cai Y., Ouyang Y., Lian X., Wu C.
Plant Cell 2018  30(10)  2352-2367
The E3 Ubiquitin Ligase HAF1 Modulates Circadian Accumulation of EARLY FLOWERING3 to Control heading date in Rice under Long-Day Conditions.
Hwang S.G., Kim J.J., Lim S.D., Park Y.C., Moon J.C., Jang C.S.
Physiol Plant 2016   
Molecular dissection of Oryza sativa salt-induced RING finger protein 1 (OsSIRP1): possible involvement in the sensitivity response to salinity stress.
Yang Y., Fu D., Zhu C., He Y., Zhang H., Liu T., Li X., Wu C.
Plant Cell 2015   
The RING-Finger Ubiquitin Ligase HAF1 Mediates heading date 1 Degradation during Photoperiodic Flowering in Rice.
Sun,S.Y., Chao,D.Y., Li,X.M., Shi,M., Gao,J.P., Zhu,M.Z., Yang,H.Q., Luan,S. and Lin,H.X.
Nat. Cell Biol. 2009  11(7)  845-851
OsHAL3 mediates a new pathway in the light-regulated growth of rice
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to salt stress( GO:0009651 )
nucleus( GO:0005634 )
zinc ion binding( GO:0008270 )
photoperiodism, flowering( GO:0048573 )
metal ion binding( GO:0046872 )
transferase activity( GO:0016740 )
protein ubiquitination( GO:0016567 )
regulation of growth( GO:0040008 )
circadian regulation of gene expression( GO:0032922 )
regulation of long-day photoperiodism, flowering( GO:0048586 )
Trait Ontology photoperiod sensitivity( TO:0000229 )
flowering time( TO:0002616 )
days to heading( TO:0000137 )
salt tolerance( TO:0006001 )
Plant Ontology leaf( PO:0025034 )
Related Strains
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Phenotype images
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Last updated
Jan 13, 2026

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