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Basic Information
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CGSNL Gene Symbol
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DXS3
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Gene Symbol Synonym
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OsDXS, OsDXS3, dxs3, DXS2, OsDXS2
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CGSNL Gene Name
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1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 3
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Gene Name Synonym
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1-Deoxy-D-xylulose 5-phosphate synthase 3, DXP synthase 3
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Protein Name
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1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 3
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Allele
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Chromosome No.
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7
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Explanation
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Q6YU51. GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process. catalyzing the first step of the MEP (methylerythritol phosphate) pathway. DXS2 in Choi et al. 2020.
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Trait Class
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Biochemical character
Coloration - Others
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK100909
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MSU ID
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LOC_Os07g09190.1
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RAP ID
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Os07g0190000
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Jin X., Baysal C., Drapal M., Sheng Y., Huang X., He W., Shi L., Capell T., Fraser P.D., Christou P., Zhu C.
Plants (Basel) 2021 10(7)
The Coordinated Upregulated Expression of Genes Involved in MEP, Chlorophyll, Carotenoid and Tocopherol Pathways, Mirrored the Corresponding Metabolite Contents in Rice Leaves during De-Etiolation.
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Valette M., Rey M., Doré J., Gerin F., Wisniewski-Dyé F.
Physiol Mol Biol Plants 2020 26(12) 2537-2551
Identification of a small set of genes commonly regulated in rice roots in response to beneficial rhizobacteria.
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You M.K., Lee Y.J., Kim J.K., Baek S.A., Jeon Y.A., Lim S.H., Ha S.H.
BMC Plant Biol. 2020 20(1) 167
The organ-specific differential roles of rice DXS and DXR, the first two enzymes of the MEP pathway, in carotenoid metabolism in Oryza sativa leaves and seeds.
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Choi J., Lee T., Cho J., Servante E.K., Pucker B., Summers W., Bowden S., Rahimi M., An K., An G., Bouwmeester H.J., Wallington E.J., Oldroyd G., Paszkowski U.
Nat Commun 2020 11(1) 2114
The negative regulator SMAX1 controls mycorrhizal symbiosis and strigolactone biosynthesis in rice.
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Yoshida Y., Miyamoto K., Yamane H., Nishizawa Y., Minami E., Nojiri H., Okada K.
Physiol Plant 2017
OsTGAP1 is responsible for JA-inducible diterpenoid phytoalexin biosynthesis in rice roots with biological impacts on allelopathic interaction.
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Miyamoto K., Matsumoto T., Okada A., Komiyama K., Chujo T., Yoshikawa H., Nojiri H., Yamane H., Okada K.
PLoS ONE 2014 9(8) e105823
Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells.
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Park H.L., Lee S.W., Jung K.H., Hahn T.R., Cho M.H.
Phytochemistry 2013 96 57-71
Transcriptomic analysis of UV-treated rice leaves reveals UV-induced phytoalexin biosynthetic pathways and their regulatory networks in rice.
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Okada K.
Biosci. Biotechnol. Biochem. 2011 75(7) 1219-25
The biosynthesis of isoprenoids and the mechanisms regulating it in plants.
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Okada A,Okada K,Miyamoto K,Koga J,Shibuya N,Nojiri H,Yamane H
J. Biol. Chem. 2009 284(39) 26510-8
OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice.
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Okada,A., Shimizu,T., Okada,K., Kuzuyama,T., Koga,J., Shibuya,N., Nojiri,H. and Yamane,H.
Plant Mol. Biol. 2007 65(1-2) 177-187
Elicitor induced activation of the methylerythritol phosphate pathway toward phytoalexins biosynthesis in rice
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Bo-Ra Kim, Soo-Un Kim, Yung-Jin Chang
Biotechnol. Lett. 2005 27(14) 997-1001
Differential expression of three 1-deoxy-D: -xylulose-5-phosphate synthase genes in rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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1-deoxy-D-xylulose-5-phosphate synthase activity( GO:0008661 )
thiamin biosynthetic process( GO:0009228 )
chloroplast( GO:0009507 )
response to UV( GO:0009411 )
response to molecule of fungal origin( GO:0002238 )
terpenoid biosynthetic process( GO:0016114 )
metal ion binding( GO:0046872 )
diterpene phytoalexin biosynthetic process( GO:0051502 )
symbiosis, encompassing mutualism through parasitism( GO:0044403 )
response to symbiotic bacterium( GO:0009609 )
isoprenoid biosynthetic process( GO:0008299 )
isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway( GO:0019288 )
response to light stimulus( GO:0009416 )
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Trait Ontology
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UV light sensitivity( TO:0000160 )
carotene content( TO:0000289 )
light sensitivity( TO:0000075 )
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Plant Ontology
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root( PO:0009005 )
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Related Strains
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Phenotype images
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Last updated
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Mar 7, 2022
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Update info.