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Basic Information
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CGSNL Gene Symbol
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EIF4A1
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Gene Symbol Synonym
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eIF-4a, EIF4A, OseIF4A, eIF4A1, elF-4A, eIF4A-1, OsRH4
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CGSNL Gene Name
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EUKARYOTIC INITIATION FACTOR 4A-1
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Gene Name Synonym
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EUKARYOTIC INITIATION FACTOR 4A, eukaryotic initiation factor 4A-1, initiation factor eIF-4A, initiation factor eIF-4AII, RNA helicase 4
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Protein Name
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EUKARYOTIC INITIATION FACTOR 4A-1
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Allele
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Chromosome No.
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6
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Explanation
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D12627. D10398 (partial cds). P35683. AB046416. D16090. D29715. initiation factor eIF-4AII in Sasaki et al. 1994. DEAD-box RNA helicase protein. rice ortholog of NbeIF4A. OseIF4A mRNA is targeted by vsiRNA-4A (viral small interfering RNA 4A) for cleavage (Zhang et al. 2021).
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Trait Class
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Tolerance and resistance - Disease resistance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK119234
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MSU ID
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LOC_Os06g48750.1
LOC_Os06g48750.2
LOC_Os06g48750.3
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RAP ID
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Os06g0701100
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Zhang X., Yin Y., Su Y., Jia Z., Jiang L., Lu Y., Zheng H., Peng J., Rao S., Wu G., Chen J., Yan F.
PLoS Pathog. 2021 17(9) e1009963
eIF4A, a target of siRNA derived from rice stripe virus, negatively regulates antiviral autophagy by interacting with ATG5 in Nicotiana benthamiana.
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Xu J., Liu C., Li M., Hu J., Zhu L., Zeng D., Yang Y., Peng Y., Ruan B., Guo L., Li H.
Gene 2015 555(2) 318-28
A rice DEAD-box RNA helicase protein, OsRH17, suppresses 16S ribosomal RNA maturation in Escherichia coli.
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Kato,A., Fujita,S. and Komeda,Y.
DNA Seq. 2001 12(5-6) 295-303
Identification and characterization of two genes encoding the eukaryotic initiation factor 4A in rice.
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Aubourg,S., Takvorian,A., Cheron,A., Kreis,M. and Lecharny,A.
Gene 1997 199(1-2) 241-253
Structure, organization and putative function of the genes identified within a 23.9-kb fragment from Arabidopsis thaliana chromosome IV.
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Hihara,Y., Shoda,K., Liu,Q., Hara,C., Umeda,M., Toriyama,K. and Uchiyama,H.
Plant Biotechnol. 1997 14(1) 71-75
Expressed sequence tags in developing anthers of rice (Oryza sativa L.)
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Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994 6(4) 615-624
Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
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Nishi,R., Kidou,S., Uchimiya,H. and Kato,A.
Biochim. Biophys. Acta 1993 1174(3) 293-294
Isolation and characterization of a rice cDNA which encodes the eukaryotic initiation factor 4A.
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Uchimiya,H., Kidou,S., Shimazaki,T., Aotsuka,S., Takamatsu,S., Nishi,R., Hashimoto,H., Matsubayashi,Y., Kidou,N., Umeda,M. and Kato,A.
Plant J. 1992 2(6) 1005-1009
Random sequencing og cDNA librariesreveals a variety of expressed genes in cultured cells of rice (Oryza sativa L.)
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to virus( GO:0009615 )
defense response to virus( GO:0051607 )
negative regulation of autophagy( GO:0010507 )
translation initiation factor activity( GO:0003743 )
ATP binding( GO:0005524 )
ATP-dependent helicase activity( GO:0008026 )
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Trait Ontology
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viral disease resistance( TO:0000148 )
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Mar 18, 2022
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Update info.