|
Basic Information
|
|
CGSNL Gene Symbol
|
_
|
|
Gene Symbol Synonym
|
RAG2, RA14B, RA14, OsEnS-98
|
|
CGSNL Gene Name
|
_
|
|
Gene Name Synonym
|
rice allergen 14B, endosperm-specific gene 98
|
|
Protein Name
|
_
|
|
Allele
|
|
|
Chromosome No.
|
7
|
|
Explanation
|
rice seed allergenic protein (RA). D11434. D42139. Q01882. a 16-kDa a-amylase/trypsin inhibitor.
|
|
Trait Class
|
Seed - Physiological traits - Longevity
Tolerance and resistance - Stress tolerance
Seed - Physiological traits - Storage substances
Character as QTL - Grain quality
Seed - Morphological traits
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK107328
|
|
MSU ID
|
LOC_Os07g11380.1
LOC_Os07g11380.2
|
|
RAP ID
|
Os07g0214300
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Li F., Ye H., Wang Y., Zhou J., Zhang G., Liu X., Lu X., Wang F., Chen Q., Chen G., Xiao Y., Tang W., Deng H.
Plants (Basel) 2024 13(7)
Transcriptomic Profiling of Two Rice Thermo-Sensitive Genic Male Sterile Lines with Contrasting Seed Storability after Artificial Accelerated Aging Treatment.
|
|
Zhou W., Wang X., Zhou D., Ouyang Y., Yao J.
Plant Biotechnol. J. 2016
Overexpression of the 16-kDa alpha-amylase/trypsin inhibitor RAG2 improves grain yield and quality of rice.
|
|
Nakamura R., Nakamura R., Adachi R., Hachisuka A., Yamada A., Ozeki Y., Teshima R.
J. Proteome Res. 2014 13(2) 489-95
Differential analysis of protein expression in RNA-binding-protein transgenic and parental rice seeds cultivated under salt stress.
|
|
Nie D.M., Ouyang Y.D., Wang X., Zhou W., Hu C.G., Yao J.
Gene 2013 530(2) 236-47
Genome-wide analysis of endosperm-specific genes in rice.
|
|
Alvarez,A.M., Adachi,T., Nakase,M., Aoki,N., Nakamura,R. and Matsuda,T.
Biochim. Biophys. Acta 1995 1251(2) 201-204
Classification of rice allergenic protein cDNAs belonging to the alpha-amylase/trypsin inhibitor gene family.
|
|
Adachi,T., Izumi,H., Yamada,T., Tanaka,K., Takeuchi,S., Nakamura,R. and Matsuda,T.
Plant Mol. Biol. 1993 21(2) 239-248
Gene structure and expression of rice seed allergenic proteins belonging to the alpha-amylase/trypsin inhibitor family.
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
serine-type endopeptidase inhibitor activity( GO:0004867 )
extracellular space( GO:0005615 )
type I hypersensitivity( GO:0016068 )
negative regulation of endopeptidase activity( GO:0010951 )
seed maturation( GO:0010431 )
response to salt stress( GO:0009651 )
response to heat( GO:0009408 )
response to humidity( GO:0009270 )
|
|
Trait Ontology
|
grain size( TO:0000397 )
1000-seed weight( TO:0000382 )
protein content( TO:0000598 )
total fat content( TO:0000602 )
seed quality( TO:0000162 )
grain yield( TO:0000396 )
grain weight( TO:0000590 )
starch content( TO:0000696 )
amylose content( TO:0000196 )
seed development trait( TO:0000653 )
salt tolerance( TO:0006001 )
heat tolerance( TO:0000259 )
humidity related trait( TO:0000441 )
seed viability( TO:0000345 )
seed longevity( TO:0000435 )
vigor related trait( TO:0000250 )
percent germination( TO:0010001 )
|
|
Plant Ontology
|
seed maturation stage( PO:0007632 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Sep 12, 2024
|
Update info.