Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | RPL5 |
| Gene Symbol Synonym | rpl5, RL5, RPL18p/L5e, RPL18p, RPL5e, OsRPL5, OsRPL5e, OsRPL18p |
| CGSNL Gene Name | RIBOSOMAL PROTEIN L5 |
| Gene Name Synonym | ribosomal protein L5, Ribosomal protein L5a, Ribosomal protein L5b |
| Protein Name | RIBOSOMAL PROTEIN L5 |
| Allele | |
| Chromosome No. | 1 |
| Explanation | LOC_Os01g67134.1 X64622. A2WXX3, Q0JGY1. D15270, D15082. a ribosomal 5S rRNA-binding protein. Ribosomal protein L5a and Ribosomal protein L5b in Sasaki et al. 1994. RPL18p/L5e in Moin et al. 2016. |
| Trait Class |
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance Other |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK104693
|
| MSU ID |
LOC_Os01g67134.1
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| RAP ID |
Os01g0896800 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Moin M., Bakshi A., Madhav M.S., Kirti P.B.
Front Chem 2017 5 97 Expression Profiling of Ribosomal Protein Gene Family in Dehydration Stress Responses and Characterization of Transgenic Rice Plants Overexpressing <i>RPL23A</i> for Water-Use Efficiency and Tolerance to Drought and Salt Stresses.
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Moin M., Bakshi A., Saha A., Dutta M., Sheshu M Madhav, P B Kirti
Front Plant Sci 2016 7 1284 Rice Ribosomal Protein Large Subunit Genes and Their Spatio-temporal and Stress Regulation.
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Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994 6(4) 615-624 Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
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Kim,J.K. and Wu,R.
Plant Mol. Biol. 1993 23(2) 409-413 A rice (Oryza sativa L.) cDNA encodes a protein sequence homologous to the eukaryotic ribosomal 5S RNA-binding protein.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
structural constituent of ribosome( GO:0003735 )
ribosome( GO:0005840 ) translation( GO:0006412 ) 5S rRNA binding( GO:0008097 ) ribosomal large subunit assembly( GO:0000027 ) nucleus( GO:0005634 ) response to heat( GO:0009408 ) response to cold( GO:0009409 ) response to salicylic acid stimulus( GO:0009751 ) response to jasmonic acid stimulus( GO:0009753 ) cytosolic large ribosomal subunit( GO:0022625 ) defense response to bacterium( GO:0042742 ) response to hydrogen peroxide( GO:0042542 ) response to water deprivation( GO:0009414 ) |
| Trait Ontology |
cold tolerance( TO:0000303 )
jasmonic acid sensitivity( TO:0000172 ) heat tolerance( TO:0000259 ) oxidative stress( TO:0002657 ) drought tolerance( TO:0000276 ) bacterial blight disease resistance( TO:0000175 ) |
| Plant Ontology |
shoot system( PO:0009006 )
plant embryo( PO:0009009 ) endosperm( PO:0009089 ) plumule( PO:0020032 ) leaf( PO:0025034 ) |
| Related Strains | |
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| Phenotype images | |
| - | |
| Last updated | |
| Jul 18, 2018 | |
