Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol PK3
Gene Symbol Synonym OsPK3, OsPK5, PK5
CGSNL Gene Name PYRUVATE KINASE 3
Gene Name Synonym pyruvate kinase, pyruvate kinase 3
Protein Name PYRUVATE KINASE 3
Allele ospk3
Chromosome No. 4
Explanation D17768. D22530. EU267984. cytosolic pyruvate kinase (PKc) subunit. OsPK5 in Zhu et al. 2022. PO:0030104: caryopsis fruit. PO:0030123: panicle inflorescence. GO:2000377: regulation of reactive oxygen species metabolic process.
Trait Class Biochemical character
Seed - Physiological traits - Storage substances
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK100393
MSU ID LOC_Os04g58110.1
RAP ID Os04g0677500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Zhu F., Wang K., Li D., Liu Z., Li M., Wang Z., Li X., Lan X., Guan Q.
Rice (N Y) 2022  15(1)  69
OsSAP6 Positively Regulates Soda Saline-Alkaline Stress Tolerance in Rice.
Dong N., Chen L., Ahmad S., Cai Y., Duan Y., Li X., Liu Y., Jiao G., Xie L., Hu S., Sheng Z., Shao G., Wang L., Tang S., Wei X., Hu P.
Int J Mol Sci 2022  23(23) 
Genome-Wide Analysis and Functional Characterization of Pyruvate Kinase (PK) Gene Family Modulating Rice Yield and Quality.
Hu L., Tu B., Yang W., Yuan H., Li J., Guo L., Zheng L., Chen W., Zhu X., Wang Y., Qin P., Ma B., Li S.
Plant Physiol. 2020  183(3)  1073-1087
Mitochondria-Associated pyruvate kinase Complexes Regulate Grain Filling in Rice.
Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994  6(4)  615-624
Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
Umeda,M., Hara,C., Matsubayashi,Y., Li,H.H., Liu,Q., Tadokoro,F., Aotsuka,S. and Uchimiya,H.
Plant Mol. Biol. 1994  25(3)  469-478
Expressed sequence tags from cultured cells of rice (Oryza sativa L.) under stressed conditions: analysis of transcripts of genes engaged in ATP-generating pathways.
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to hydrogen peroxide( GO:0042542 )
response to alkalinity( GO:0010446 )
response to salt stress( GO:0009651 )
cytoplasm( GO:0005737 )
seed development( GO:0048316 )
amyloplast organization( GO:0009660 )
endosperm development( GO:0009960 )
mitochondrion( GO:0005739 )
sucrose transport( GO:0015770 )
phloem loading( GO:0009915 )
seed maturation( GO:0010431 )
magnesium ion binding( GO:0000287 )
pyruvate kinase activity( GO:0004743 )
glycolysis( GO:0006096 )
potassium ion binding( GO:0030955 )
Trait Ontology plant height( TO:0000207 )
grain thickness( TO:0000399 )
grain weight( TO:0000590 )
chalky endosperm( TO:0000266 )
floury endosperm( TO:0000104 )
endosperm color( TO:0000487 )
starch grain size( TO:0002655 )
starch grain shape( TO:0002656 )
starch content( TO:0000696 )
total fat content( TO:0000602 )
protein content( TO:0000598 )
seed development trait( TO:0000653 )
seed composition based quality trait( TO:0000488 )
1000-seed weight( TO:0000382 )
amylose content( TO:0000196 )
grain yield per plant( TO:0000449 )
salt tolerance( TO:0006001 )
alkali sensitivity( TO:0000481 )
Plant Ontology seed maturation stage( PO:0007632 )
leaf( PO:0025034 )
mesophyll cell( PO:0004006 )
stem internode( PO:0020142 )
stem node( PO:0020141 )
nucellar epidermis( PO:0008006 )
aleurone layer( PO:0005360 )
fruit vascular system( PO:0008003 )
companion cell( PO:0000071 )
sclerenchyma cell( PO:0000077 )
vascular bundle( PO:0005020 )
endosperm development stage( PO:0007633 )
seed development stage( PO:0001170 )
seed( PO:0009010 )
inflorescence( PO:0009049 )
root( PO:0009005 )
Related Strains
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Phenotype images
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Last updated
Jun 7, 2023

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