Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol IRX10
Gene Symbol Synonym OsIRX10, OsIRX10L, IRX10L, OsBC18, BC18, OsIRX18, IRX18
CGSNL Gene Name IRREGULAR XYLEM 10
Gene Name Synonym rice ortholog of Arabidopsis IRX10, IRREGULAR XYLEM10, IRREGULAR XYLEM 18, BRITTLE CULM 18
Protein Name
Allele Osirx10
Chromosome No. 1
Explanation Q8S1X7. IRX10 family member. GT47 family of glycosyltransferase. OsIRX10L in Sun et al. 2020, Zhu et al. 2021. IRREGULAR XYLEM 18 (OsBC18 in Figure S7 & Supplemental Table S1) in Chen et al. 2023.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os01g70200.1
RAP ID Os01g0926700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Xu R., Liu Z., Wang X., Zhou Y., Zhang B.
Plant Physiol. 2023   
Xylan clustering on the pollen surface is required for exine patterning.
Chen Y., Qi H., Yang L., Xu L., Wang J., Guo J., Zhang L., Tan Y., Pan R., Shu Q., Qian Q., Song S.
Cell Rep 2023  42(7)  112702
The OsbHLH002/OsICE1-OSH1 module orchestrates secondary cell wall formation in rice.
Zhu C.L., Xing B., Teng S.Z., Deng C., Shen Z.Y., Ai P.F., Lu T.G., Zhang S.W., Zhang Z.G.
Front Plant Sci 2021  12  760041
OsRELA Regulates Leaf Inclination by Repressing the Transcriptional Activity of OsLIC in Rice.
Sun X., Ma Y., Yang C., Li J.
Plant Mol. Biol. 2020  104(3)  249-261
Rice OVATE family protein 6 regulates leaf angle by modulating secondary cell wall biosynthesis.
Li F., Liu S., Xu H., Xu Q.
Biotechnol Biofuels 2018  11  298
A novel FC17/CESA4 mutation causes increased biomass saccharification and lodging resistance by remodeling cell wall in rice.
Zhang B., Zhao T., Yu W., Kuang B., Yao Y., Liu T., Chen X., Zhang W., Wu A.M.
J. Plant Res. 2014  127(3)  423-32
Functional conservation of the glycosyltransferase gene GT47A in the monocot rice.
Chen X., Vega-Sánchez ME., Verhertbruggen Y., Chiniquy D., Canlas P.E., Fagerström A., Prak L., Christensen U., Oikawa A., Chern M., Zuo S., Lin F., Auer M., Willats W.G., Bartley L., Harholt J., Scheller H.V., Ronald P.C.
Mol Plant 2013  6(2)  570-3
Inactivation of OsIRX10 leads to decreased xylan content in rice culm cell walls and improved biomass saccharification.
DB Reference
Gramene ID -
Ontologies
Gene Ontology xylan biosynthetic process( GO:0045492 )
Golgi membrane( GO:0000139 )
integral to membrane( GO:0016021 )
transferase activity, transferring glycosyl groups( GO:0016757 )
Trait Ontology -
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Mar 17, 2025

/rice/oryzabase