Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol TID1
Gene Symbol Synonym OsTID1, TubA2, SRS5, OS-TubA2, OsTubA2, OsSRS5,
CGSNL Gene Name TWISTED DWARF 1
Gene Name Synonym TWISTED DWARF1, Tubulin alpha-2, Tubulin alpha-2 chain, small and round seed 5
Protein Name ALPHA TUBLIN
Allele Tid1-1, Srs5
Chromosome No. 11
Explanation AB512760. Q53M52. X91807. D29735.
Trait Class Biochemical character
Vegetative organ - Culm
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Expression
Sequence/Locus
cDNA Accession No. AK102560
MSU ID LOC_Os11g14220.1
RAP ID Os11g0247300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Chun Y., Fang J., Zafar S.A., Shang J., Zhao J., Yuan S., Li X.
Rice (N Y) 2020  13(1)  7
MINI SEED 2 (MIS2) Encodes a Receptor-like Kinase that Controls grain size and Shape in Rice.
Liu L., Kuang Y., Yan F., Li S., Ren B., Gosavi G., Spetz C., Li X., Wang X., Zhou X., Zhou H.
Plant Biotechnol. J. 2020   
Developing a novel artificial rice germplasm for dinitroaniline herbicide resistance by base editing of OsTubA2.
Gong R., Cao H., Zhang J., Xie K., Wang D., Yu S.
Plant J. 2018  94(1)  32-47
Divergent functions of the GAGA-binding transcription factor family in rice.
Segami S., Takehara K., Yamamoto T., Kido S., Kondo S., Iwasaki Y., Miura K.
Breed. Sci. 2017  67(4)  393-397
Overexpression of SRS5 improves grain size of brassinosteroid-related dwarf mutants in rice (Oryza sativa L.).
Si L., Chen J., Huang X., Gong H., Luo J., Hou Q., Zhou T., Lu T., Zhu J., Shangguan Y., Chen E., Gong C., Zhao Q., Jing Y., Zhao Y., Li Y., Cui L., Fan D., Lu Y., Weng Q., Wang Y., Zhan Q., Liu K., Wei X., An K., An G., Han B.
Nat. Genet. 2016  48(4)  447-56
OsSPL13 controls grain size in cultivated rice.
Song Y.a, Cui J.a, Zhang H.b, Wang G.a, Zhao F.J.c, Shen Z.a
Plant Soil 2013  366  647-658
Proteomic analysis of copper stress responses in the roots of two rice (Oryza sativa L.) varieties differing in Cu tolerance
Ikeda M., Miura K., Aya K., Kitano H., Matsuoka M.
Curr. Opin. Plant Biol. 2013  16(2)  213-20
Genes offering the potential for designing yield-related traits in rice.
Segami S., Kono I., Ando T., Yano M., Kitano H., Miura K., Iwasaki Y.
Rice (N Y) 2012  5  4
Small and round seed 5 gene encodes alphatubulin regulating seed cell elongation in rice
Sunohara H,Kawai T,Shimizu-Sato S,Sato Y,Sato K,Kitano H
Genes Genet. Syst. 2009  84  209-18
A dominant mutation of TWISTED DWARF 1 encoding an alpha-tubulin protein causes severe dwarfism and right helical growth in rice.
Hihara,Y., Shoda,K., Liu,Q., Hara,C., Umeda,M., Toriyama,K. and Uchiyama,H.
Plant Biotechnol. 1997  14(1)  71-75
Expressed sequence tags in developing anthers of rice (Oryza sativa L.)
X Qin, S Gianì, D Breviario
Biochim. Biophys. Acta 1997  1354(1)  19-23
Molecular cloning of three rice alpha-tubulin isotypes: differential expression in tissues and during flower development.
TextPresso Search Search textpresso for TID1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to herbicide( GO:0009635 )
response to copper ion( GO:0046688 )
microtubule-based process( GO:0007017 )
microtubule( GO:0005874 )
cytoplasm( GO:0005737 )
regulation of unidimensional cell growth( GO:0051510 )
GTP binding( GO:0005525 )
structural constituent of cytoskeleton( GO:0005200 )
GTPase activity( GO:0003924 )
protein polymerization( GO:0051258 )
Trait Ontology grain length( TO:0000734 )
grain size( TO:0000397 )
seed length( TO:0000146 )
copper sensitivity( TO:0000021 )
seed size( TO:0000391 )
seed shape( TO:0000484 )
herbicide sensitivity( TO:0000058 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Sep 20, 2020


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