Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym trnfM(CAT), trnfM
CGSNL Gene Name _
Gene Name Synonym tRNA-Met, initiator methionine tRNA
Protein Name
Allele
Chromosome No. Mt
Explanation DQ167399 (isolate 93-11 complete mitochondrial genome), DQ167400 (cultivar Nipponbare), DQ167807 (isolate PA64S). D32052. BA000029 (Nipponbare complete mitochondrial genome). JN861111, JN861112 (indica Hassawi and IR1112 x Hassawi complete mitochondrial genome). JF281153 (indica IR6888 complete mitochondrial genome). The locations of BA000029 (DQ167400 ): trnfM and JN861111 (JF281153 ): trnfM are in conflict.
Trait Class
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links Organelle Genome
INSD Accession List
(Test version) 		-
Map
Locate(cM)
References
Tian,X., Zheng,J., Hu,S. and Yu,J.
Plant Physiol. 2006  140(2)  401-410
The Rice Mitochondrial Genomes and Their Variations
Notsu,Y., Masood,S., Nishikawa,T., Kubo,N., Akiduki,G., Nakazono,M., Hirai,A. and Kadowaki,K.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002  268(4)  434-445
The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants
Nakazono,M., Tsutsumi,N. and Hirai,A.
Plant Sci. 1995  105  227-234
The CRTA motif is present in the promoters of mitochondrial genes of rice
Nakazono,M., Tsutsumi,N., Sugiura,M. and Hirai,A.
Plant Mol. Biol. 1995  28(2)  343-346
A small repeated sequence contains the transcription initiation sites for both trnfM and rrn26 in rice mitochondria
Itadani,H., Wakasugi,T., Sugita,M., Sugiura,M., Nakazono,M. and Hirai,A.
Plant Cell Physiol. 1994  35(8)  1239-1244
Nucleotide sequence of a 28-kbp portion of rice mitochondrial DNA: the existence of many sequences that correspond to parts of mitochondrial genes in intergenic regions
DB Reference
Gramene ID -
Ontologies
Gene Ontology -
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Aug 17, 2014

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