Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol RPL2
Gene Symbol Synonym rpl2
CGSNL Gene Name RIBOSOMAL PROTEIN L2
Gene Name Synonym ribosomal protein L2
Protein Name RIBOSOMAL PROTEIN L2
Allele
Chromosome No. Mt
Explanation LOC_Osm1g00440. P92812, P0C8K6, Q2F969. DQ167399 (isolate 93-11 complete mitochondrial genome), DQ167400: AAZ99354 (cultivar Nipponbare), DQ167807 (isolate PA64S). D78336. BA000029: BAC19886 (Nipponbare complete mitochondrial genome). JF281153:AEZ03727 (indica IR6888 complete mitochondrial genome). AB763981, AB763987. JN861111: AER12994, JN861112 (indica Hassawi and IR1112 x Hassawi complete mitochondrial genome). The locations of BA000029: BAC19886 (DQ167400: AAZ99354, JF281153:AEZ03727) and JN861111: AER12994 are in conflict.
Trait Class Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Osm1g00440
RAP ID -
Links Organelle Genome
INSD Accession List
(Test version) 		-
Map
Locate(cM)
References
Toda T., Toriyama K.
Rice (N Y) 2013  6  2
Re-sequencing of mitochondrial genes in a standard rice cultivar Nipponbare.
Bentolila,S. and Stefanov,S.
Plant Physiol. 2012  158(2)  996-1017
A reevaluation of rice mitochondrial evolution based on the complete sequence of male-fertile and male-sterile mitochondrial genomes
Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012  7 (7)  E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
Tang,J., Xia,H., Cao,M., Zhang,X., Zeng,W., Hu,S., Tong,W., Wang,J., Wang,J., Yu,J., Yang,H. and Zhu,L.
Plant Physiol. 2004  135(1)  412-420
A Comparison of Rice Chloroplast Genomes.
Notsu,Y., Masood,S., Nishikawa,T., Kubo,N., Akiduki,G., Nakazono,M., Hirai,A. and Kadowaki,K.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002  268(4)  434-445
The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants
Kubo,N., Ozawa,K., Hino,T. and Kadowaki,K.
Plant Mol. Biol. 1996  31(4)  853-862
A ribosomal protein L2 gene is transcribed, spliced, and edited at one site in rice mitochondria
DB Reference
Gramene ID -
Ontologies
Gene Ontology RNA binding( GO:0003723 )
translation( GO:0006412 )
RNA elongation( GO:0006354 )
mitochondrion( GO:0005739 )
structural constituent of ribosome( GO:0003735 )
large ribosomal subunit( GO:0015934 )
photorespiration( GO:0009853 )
RNA modification( GO:0009451 )
ubiquitin-dependent protein catabolic process( GO:0006511 )
proteasome core complex assembly( GO:0080129 )
response to misfolded protein( GO:0051788 )
transferase activity( GO:0016740 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Aug 26, 2014

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