Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym cox2, coxII
CGSNL Gene Name _
Gene Name Synonym cytochrome oxidase subunit 2, cytochrome oxidase subunit II, Cytochrome c oxidase subunit 2
Protein Name
Allele
Chromosome No. Mt
Explanation LOC_Osm1g00330. DQ167399 (isolate 93-11 complete mitochondrial genome), DQ167400: AAZ99344 (cultivar Nipponbare), DQ167807 (isolate PA64S). BA000029: BAC19876 (Nipponbare complete mitochondrial genome). JN861111: AER13026, JN861112 (indica Hassawi and IR1112 x Hassawi complete mitochondrial genome). JF281153: AEZ03737 (indica IR6888 complete mitochondrial genome).
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Osm1g00330
RAP ID -
Links Organelle Genome
INSD Accession List
(Test version) 		-
Map
Locate(cM)
References
Chen N., Wang P., Li C., Wang Q., Pan J., Xiao F., Wang Y., Zhang K., Li C., Yang B., Sun C., Deng X.
Plant Cell Physiol. 2018   
A single nucleotide mutation of IspE gene participating in the MEP pathway for isoprenoid biosynthesis causes green-revertible yellow leaf phenotype in rice.
Bentolila,S. and Stefanov,S.
Plant Physiol. 2012  158(2)  996-1017
A reevaluation of rice mitochondrial evolution based on the complete sequence of male-fertile and male-sterile mitochondrial genomes
Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012  7 (7)  E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
Tian,X., Zheng,J., Hu,S. and Yu,J.
Plant Physiol. 2006  140(2)  401-410
The Rice Mitochondrial Genomes and Their Variations
Notsu,Y., Masood,S., Nishikawa,T., Kubo,N., Akiduki,G., Nakazono,M., Hirai,A. and Kadowaki,K.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002  268(4)  434-445
The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants
M Iwahashi, M Nakazono, A Kanno, K Sugino, T Ishibashi, A Hirai
Theor. Appl. Genet. 1992  84(3-4)  275-9
Genetic and physical maps and a clone bank of mitochondrial DNA from rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology cytochrome-c oxidase activity( GO:0004129 )
copper ion binding( GO:0005507 )
mitochondrion( GO:0005739 )
mitochondrial inner membrane( GO:0005743 )
chloroplast( GO:0009507 )
electron transport chain( GO:0022900 )
respiratory chain( GO:0070469 )
integral to membrane( GO:0016021 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Sep 8, 2019

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