Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol RPS3
Gene Symbol Synonym rps3
CGSNL Gene Name RIBOSOMAL PROTEIN S3
Gene Name Synonym ribosomal protein S3
Protein Name RIBOSOMAL PROTEIN S3
Allele
Chromosome No. Mt
Explanation LOC_Osm1g00260. DQ167399 (isolate 93-11 complete mitochondrial genome), DQ167400: AAZ99355 (cultivar Nipponbare), DQ167807 (isolate PA64S). D21251. P46773. S68845 (intron). BA000029: BAC19869 (Nipponbare complete mitochondrial genome). JN861111: AER12981, JN861112 (indica Hassawi and IR1112 x Hassawi complete mitochondrial genome). JF281153: AAZ99355 (indica IR6888 complete mitochondrial genome). The locations of BA000029: BAC19869 (DQ167400: AAZ99355) and JN861111: AER12981 (JF281153: AAZ99355) are in conflict.
Trait Class Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Osm1g00260
RAP ID -
Links Organelle Genome
INSD Accession List
(Test version) 		-
Map
Locate(cM)
References
Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012  7 (7)  E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
Bentolila,S. and Stefanov,S.
Plant Physiol. 2012  158(2)  996-1017
A reevaluation of rice mitochondrial evolution based on the complete sequence of male-fertile and male-sterile mitochondrial genomes
Ngangkham U., Parida S.K., De S., Anand Raj Kumar K., Singh A.K., Singh N.K., Mohapatra T.
Molecular Breeding 2010  26(2)  275-292
Genic markers for wild abortive (WA) cytoplasm based male sterility and its fertility restoration in rice
Tang,J., Xia,H., Cao,M., Zhang,X., Zeng,W., Hu,S., Tong,W., Wang,J., Wang,J., Yu,J., Yang,H. and Zhu,L.
Plant Physiol. 2004  135(1)  412-420
A Comparison of Rice Chloroplast Genomes.
Notsu,Y., Masood,S., Nishikawa,T., Kubo,N., Akiduki,G., Nakazono,M., Hirai,A. and Kadowaki,K.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002  268(4)  434-445
The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants
Nakazono,M., Tsutsumi,N. and Hirai,A.
Plant Sci. 1995  105  227-234
The CRTA motif is present in the promoters of mitochondrial genes of rice
Nakazono,M., Itadani,H., Wakasugi,T., Tsutsumi,N., Sugiura,M. and Hirai,A.
Curr. Genet. 1995  27(1)  184-189
The rps3-rpl16-nad3-rps12 gene cluster in rice mitochondrial DNA is transcribed from alternative promoters.
Nakazono,M., Kanno,A., Tsutsumi,N. and Hirai,A.
Plant Mol. Biol. 1994  24(2)  273-281
Palindromic repeated sequences (PRSs) in the mitochondrial genome of rice: evidence for their insertion after divergence of the genus Oryza from the other Gramineae
DB Reference
Gramene ID -
Ontologies
Gene Ontology RNA binding( GO:0003723 )
structural constituent of ribosome( GO:0003735 )
mitochondrion( GO:0005739 )
translation( GO:0006412 )
ribosome( GO:0005840 )
Trait Ontology -
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Aug 27, 2015

/rice/oryzabase