Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | _ |
| Gene Symbol Synonym | orf25, atp4 |
| CGSNL Gene Name | _ |
| Gene Name Synonym | ATPase subunit 4 |
| Protein Name | |
| Allele | |
| Chromosome No. | Mt |
| Explanation | LOC_Osm1g00120. DQ167399 (isolate 93-11 complete mitochondrial genome), DQ167400: AAZ99368 (cultivar Nipponbare), DQ167807 (isolate PA64S). M74241. Q00058. BA000029: BAC19854 (Nipponbare complete mitochondrial genome). JN861111:AER13008, JN861112 (indica Hassawi and IR1112 x Hassawi complete mitochondrial genome). JF281153: AEZ03744 (indica IR6888 complete mitochondrial genome). The locations of BA000029: BAC19854 and DQ167400: AAZ99368 (JN861111, JN861112, JF281153) are in conflict. atp4 in JF281153. |
| Trait Class |
Biochemical character
|
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. | - |
| MSU ID |
LOC_Osm1g00120
|
| RAP ID | - |
| Links | Organelle Genome |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| References | |
|
Bentolila,S. and Stefanov,S.
Plant Physiol. 2012 158(2) 996-1017 A reevaluation of rice mitochondrial evolution based on the complete sequence of male-fertile and male-sterile mitochondrial genomes
|
|
|
Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012 7 (7) E42041 The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
|
|
|
Tian,X., Zheng,J., Hu,S. and Yu,J.
Plant Physiol. 2006 140(2) 401-410 The Rice Mitochondrial Genomes and Their Variations
|
|
|
Notsu,Y., Masood,S., Nishikawa,T., Kubo,N., Akiduki,G., Nakazono,M., Hirai,A. and Kadowaki,K.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002 268(4) 434-445 The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants
|
|
|
Liu,A.W., Narayanan,K.K., Andre,C.P., Kaleikau,E.K. and Walbot,V.
Curr. Genet. 1992 21(6) 507-513 Co-transcription of orf25 and coxIII in rice mitochondria
|
|
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)( GO:0000276 )
mitochondrion( GO:0005739 ) zinc ion binding( GO:0008270 ) hydrogen ion transmembrane transporter activity( GO:0015078 ) ATP synthesis coupled proton transport( GO:0015986 ) integral to membrane( GO:0016021 ) |
| Trait Ontology | - |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Aug 22, 2014 | |
