Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym orfB, atp8
CGSNL Gene Name _
Gene Name Synonym ATPase subunit 8
Protein Name
Allele
Chromosome No. Mt
Explanation LOC_Osm1g00170. DQ167399 (isolate 93-11 complete mitochondrial genome), DQ167400: AAZ99386 (cultivar Nipponbare), DQ167807 (isolate PA64S). BA000029: BAC19860 (Nipponbare complete mitochondrial genome). JN861111: AER13023, JN861112 (indica Hassawi and IR1112 x Hassawi complete mitochondrial genome). JF281153: AEZ03753 (indica IR6888 complete mitochondrial genome). atp8 in JF281153.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Osm1g00170
RAP ID -
Links Organelle Genome
INSD Accession List
(Test version) 		-
Map
Locate(cM)
References
Chen N., Wang P., Li C., Wang Q., Pan J., Xiao F., Wang Y., Zhang K., Li C., Yang B., Sun C., Deng X.
Plant Cell Physiol. 2018   
A single nucleotide mutation of IspE gene participating in the MEP pathway for isoprenoid biosynthesis causes green-revertible yellow leaf phenotype in rice.
Bentolila,S. and Stefanov,S.
Plant Physiol. 2012  158(2)  996-1017
A reevaluation of rice mitochondrial evolution based on the complete sequence of male-fertile and male-sterile mitochondrial genomes
Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012  7 (7)  E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
Das S., Sen S., Chakraborty A., Chakraborti P., Maiti M.K., Basu A., Basu D., Sen S.K.
BMC Plant Biol 2010  10  39-
An unedited 1.1 kb mitochondrial orfB gene transcript in the wild abortive cytoplasmic male sterility (WA-CMS) system of Oryza sativa L. subsp. indica.
Tian,X., Zheng,J., Hu,S. and Yu,J.
Plant Physiol. 2006  140(2)  401-410
The Rice Mitochondrial Genomes and Their Variations
Notsu,Y., Masood,S., Nishikawa,T., Kubo,N., Akiduki,G., Nakazono,M., Hirai,A. and Kadowaki,K.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002  268(4)  434-445
The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants
DB Reference
Gramene ID -
Ontologies
Gene Ontology mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)( GO:0000276 )
vacuole( GO:0005773 )
mitochondrion( GO:0005739 )
cobalt ion binding( GO:0050897 )
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances( GO:0016820 )
integral to membrane( GO:0016021 )
ATP synthesis coupled proton transport( GO:0015986 )
hydrogen ion transmembrane transporter activity( GO:0015078 )
chloroplast( GO:0009507 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Sep 8, 2019

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