Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol NAD1
Gene Symbol Synonym nad1, Osnad1, nadI, nadIB
CGSNL Gene Name NADH DEHYDROGENASE SUBUNIT 1
Gene Name Synonym NADH dehydrogenase subunit 1
Protein Name NADH DEHYDROGENASE SUBUNIT 1
Allele
Chromosome No. Mt
Explanation DQ167399 (isolate 93-11 complete mitochondrial genome), DQ167400: AAZ99377 (cultivar Nipponbare), DQ167807 (isolate PA64S). AY507930, AY507931, AY507932, AY507937, AY507934, AY507938 (O. sativa and other wild rice species). AY792569-AY792571 (wild rice species). BA000029: BAC19852 (Nipponbare complete mitochondrial genome). JN861111:AER13032, JN861112 (indica Hassawi and IR1112 x Hassawi complete mitochondrial genome). JF281153: AEZ03746 (indica IR6888 complete mitochondrial genome). AJ278413 (intron 1).
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links Organelle Genome
INSD Accession List
(Test version) 		-
Map
Locate(cM)
References
Wu M., Cai M., Zhai R., Ye J., Zhu G., Yu F., Ye S., Zhang X.
Front Plant Sci 2023  14  1136849
A mitochondrion-associated PPR protein, WBG1, regulates grain chalkiness in rice.
Wu M., Ren Y., Cai M., Wang Y., Zhu S., Zhu J., Hao Y., Teng X., Zhu X., Jing R., Zhang H., Zhong M., Wang Y., Lei C., Zhang X., Guo X., Cheng Z., Lin Q., Wang J., Jiang L., Bao Y., Wang Y., Wan J.
New Phytol. 2019  223(2)  736-750
Rice FLOURY ENDOSPERM10 encodes a pentatricopeptide repeat protein that is essential for the trans-splicing of mitochondrial nad1 intron 1 and endosperm development.
Bentolila,S. and Stefanov,S.
Plant Physiol. 2012  158(2)  996-1017
A reevaluation of rice mitochondrial evolution based on the complete sequence of male-fertile and male-sterile mitochondrial genomes
Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012  7 (7)  E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
Ngangkham U., Parida S.K., De S., Anand Raj Kumar K., Singh A.K., Singh N.K., Mohapatra T.
Molecular Breeding 2010  26(2)  275-292
Genic markers for wild abortive (WA) cytoplasm based male sterility and its fertility restoration in rice
Tian,X., Zheng,J., Hu,S. and Yu,J.
Plant Physiol. 2006  140(2)  401-410
The Rice Mitochondrial Genomes and Their Variations
Guo,Y.L. and Ge,S.
Am. J. Bot. 2005  92(9)  1548-1558
Molecular phylogeny of Oryzeae (Poaceae) based on DNA sequences from chloroplast, mitochondrial, and nuclear genomes
Notsu,Y., Masood,S., Nishikawa,T., Kubo,N., Akiduki,G., Nakazono,M., Hirai,A. and Kadowaki,K.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002  268(4)  434-445
The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants
Carrillo,C., Chapdelaine,Y. and Bonen,L.
Mol. Gen. Genet. 2001  264(5)  595-603
Variation in sequence and RNA editing within core domains of mitochondrial group II introns among plants
DB Reference
Gramene ID -
Ontologies
Gene Ontology mitochondrion( GO:0005739 )
NADH dehydrogenase (ubiquinone) activity( GO:0008137 )
integral to membrane( GO:0016021 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 23, 2023

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