Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym SAMDC1, SAMDC, OsSAMDC4
CGSNL Gene Name _
Gene Name Synonym S-adenosylmethionine decarboxylase 1
Protein Name
Allele
Chromosome No. 9
Explanation LOC_Os09g25625. AB122089. AU062686, AU166559, C28220, C97560. OsSAMDC4 in Chen et al. 2014 and Saha and Giri 2017.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK101535
MSU ID LOC_Os09g25620.1
LOC_Os09g25620.2
LOC_Os09g25620.3
LOC_Os09g25620.4
LOC_Os09g25625.1
RAP ID Os09g0424300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Saha J., Giri K.
Gene 2017  609  88-103
Molecular phylogenomic study and the role of exogenous spermidine in the metabolic adjustment of endogenous polyamine in two rice cultivars under salt stress.
Chen M.a b, Chen J.a b c, Fang J.a b, Guo Z.a b, Lu S.a b
Plant Cell Tissue Organ Cult. 2014  116  311-322
Down-regulation of S-adenosylmethionine decarboxylase genes results in reduced plant length, pollen viability, and abiotic stress tolerance
Yamaguchi,T., Nakayama,K., Hayashi,T., Yazaki,J., Kishimoto,N., Kikuchi,S. and Koike,S.
Biosci. Biotechnol. Biochem. 2004  68(6)  1315-1323
cDNA Microarray Analysis of Rice Anther Genes under Chilling Stress at the Microsporogenesis Stage Revealed Two Genes with DNA Transposon Castaway in the 5'-Flanking Region.
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DB Reference
Gramene ID -
Ontologies
Gene Ontology adenosylmethionine decarboxylase activity( GO:0004014 )
S-adenosylmethioninamine biosynthetic process( GO:0006557 )
polyamine biosynthetic process( GO:0006596 )
spermine biosynthetic process( GO:0006597 )
spermidine biosynthetic process( GO:0008295 )
response to salt stress( GO:0009651 )
Trait Ontology temperature response trait( TO:0000432 )
salt tolerance( TO:0006001 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 27, 2017


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