Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol NDHD
Gene Symbol Synonym ndhD, NdhD, NDH4, NADH4
CGSNL Gene Name NADH DEHYDROGENASE SUBUNIT 4
Gene Name Synonym NADH dehydrogenase subunit 4, NADH dehydrogenase ND4, NADH-plastoquinone oxidoreductase subunit 4, NADH-ubiquinone oxidoreductase chain
Protein Name NADH DEHYDROGENASE SUBUNIT 4
Allele
Chromosome No. Pt
Explanation P0C324, P0C325. AY522329 (isolate 93-11 chloroplast comlete genome), AY522330: AAS46157: Nip169 (cultivar Nipponbare), AY522331 (isolate PA64S). X15901:CAA33953 (Japonica Group chloroplast genome). GU592207:ADD62872 (Japonica chloroplast comlete genome). JN861109, JN861110 (Indica Group chloroplast genome). AP006728 (Oryza nivara chloroplast genome). GO:0080183: response to photooxidative stress.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Osp1g00910
RAP ID -
Links Organelle Genome
INSD Accession List
(Test version)
-
Map
Locate(cM)
References
He Y., Li R., Li J., Zheng S., Jiang D., Li X., Liu Q., Zhou X., Lu J., Chen J., Zhou H., Zhuang C.
Plant Commun 2026  7(8)  101791
OsRNase ZS2 degrades the transcripts of NdhD and NdhF subunits of the NDH complex to modulate the balance between cyclic and linear photosynthetic electron transport.
Liu L., Wang Y., Tian Y., Song S., Wu Z., Ding X., Zheng H., Huang Y., Liu S., Dong X., Wan J., Liu L.
Plants (Basel) 2023  12(2) 
Isolation and Characterization of <i>SPOTTED LEAF42</i> Encoding a Porphobilinogen Deaminase in Rice.
L L Liu, J You, Z Zhu, K Y Chen, M M Hu, H Gu, Z W Liu, Z Y Wang, Y H Wang, S J Liu, L M Chen, X Liu, Y L Tian, S R Zhou, L Jiang, J M Wan
Plant Cell Rep. 2020  39(1)  19-33
WHITE STRIPE LEAF8, encoding a deoxyribonucleoside kinase, is involved in chloroplast development in rice.
Xiao H., Xu Y., Ni C., Zhang Q., Zhong F., Huang J., Liu W., Peng L., Zhu Y., Hu J.
J. Exp. Bot. 2018  69(12)  2923-2936
A rice dual-localized pentatricopeptide repeat protein is involved in organellar RNA editing together with OsMORFs.
Liu Z., Wang Z., Gu H., You J., Hu M., Zhang Y., Zhu Z., Wang Y., Liu S., Chen L., Liu X., Tian Y., Zhou S., Jiang L., Liu L., Wan J.
Front Plant Sci 2018  9  782
Identification and Phenotypic Characterization of <i>ZEBRA LEAF16</i> Encoding a beta-hydroxyacyl-ACP dehydratase in Rice.
Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012  7 (7)  E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
Nock,C.J., Waters,D.L., Edwards,M.A., Bowen,S.G., Rice,N., Cordeiro,G.M. and Henry,R.J.
Plant Biotechnol J. 2011  9(3)  328-333
Chloroplast genome sequences from total DNA for plant identification
Tang,J., Xia,H., Cao,M., Zhang,X., Zeng,W., Hu,S., Tong,W., Wang,J., Wang,J., Yu,J., Yang,H. and Zhu,L.
Plant Physiol. 2004  135(1)  412-420
A Comparison of Rice Chloroplast Genomes.
Masood,M.S., Nishikawa,T., Fukuoka,S., Njenga,P.K., Tsudzuki,T. and Kadowaki,K.
Gene 2004  340(1)  133-139
The complete nucleotide sequence of wild rice (Oryza nivara) chloroplast genome: first genome wide comparative sequence analysis of wild and cultivated rice
Shimada,H. and Sugiura,M.
Nucleic Acids Res. 1991  19(5)  983-995
Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes
Hiratsuka,J., Shimada,H., Whittier,R., Ishibashi,T., Sakamoto,M., Mori,M., Kondo,C., Honji,Y., Sun,C.R. and Meng,B.Y.
Mol. Gen. Genet. 1989  217(2-3)  185-194
The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of cereals
DB Reference
Gramene ID -
Ontologies
Gene Ontology photoprotection( GO:0010117 )
photoinhibition( GO:0010205 )
response to oxidative stress( GO:0006979 )
cell redox homeostasis( GO:0045454 )
regulation of photosynthesis, light reaction( GO:0042548 )
NADH dehydrogenase (ubiquinone) activity( GO:0008137 )
quinone binding( GO:0048038 )
ATP synthesis coupled electron transport( GO:0042773 )
integral to membrane( GO:0016021 )
plastid( GO:0009536 )
chloroplast thylakoid membrane( GO:0009535 )
Trait Ontology oxidative stress( TO:0002657 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 6, 2026


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