Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol RPS3
Gene Symbol Synonym rps3
CGSNL Gene Name RIBOSOMAL PROTEIN S3
Gene Name Synonym ribosomal protein S3
Protein Name RIBOSOMAL PROTEIN S3
Allele
Chromosome No. Pt
Explanation LOC_Osp1g00730. P0C484, P0C485. AY522329 (isolate 93-11 chloroplast comlete genome), AY522330: AAS46147: Nip115 (cultivar Nipponbare), AY522331 (isolate PA64S). X15901:CAA33934 (Japonica Group chloroplast genome). FJ908434-FJ908448 (wild rice species). GU592207:ADD62861 (Japonica chloroplast comlete genome). JN861109, JN861110 (Indica Group chloroplast genome). AP006728 (Oryza nivara chloroplast genome).
Trait Class Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Osp1g00730
RAP ID -
Links Organelle Genome
INSD Accession List
(Test version) 		-
Map
Locate(cM)
References
Liu H., Ren D., Jiang L., Li X., Yao Y., Mi L., Chen W., Mo A., Jiang N., Yang J., Chen P., Ma H., Luo X., Lu P.
Plant Cell 2020   
A Natural Variation in PLEIOTROPIC DEVELOPMENTAL DEFECTS Uncovers a Crucial Role for Chloroplast tRNA Modification in Translation and Plant Development.
Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012  7 (7)  E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
Nock,C.J., Waters,D.L., Edwards,M.A., Bowen,S.G., Rice,N., Cordeiro,G.M. and Henry,R.J.
Plant Biotechnol J. 2011  9(3)  328-333
Chloroplast genome sequences from total DNA for plant identification
Tang,L., Zou,X.H., Achoundong,G., Potgieter,C., Second,G., Zhang,D.Y. and Ge,S.
Mol. Phylogenet. Evol. 2010  54(1)  266-277
Phylogeny and biogeography of the rice tribe (Oryzeae): evidence from combined analysis of 20 chloroplast fragments
Tang,J., Xia,H., Cao,M., Zhang,X., Zeng,W., Hu,S., Tong,W., Wang,J., Wang,J., Yu,J., Yang,H. and Zhu,L.
Plant Physiol. 2004  135(1)  412-420
A Comparison of Rice Chloroplast Genomes.
Masood,M.S., Nishikawa,T., Fukuoka,S., Njenga,P.K., Tsudzuki,T. and Kadowaki,K.
Gene 2004  340(1)  133-139
The complete nucleotide sequence of wild rice (Oryza nivara) chloroplast genome: first genome wide comparative sequence analysis of wild and cultivated rice
Shimada,H. and Sugiura,M.
Nucleic Acids Res. 1991  19(5)  983-995
Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes
Hiratsuka,J., Shimada,H., Whittier,R., Ishibashi,T., Sakamoto,M., Mori,M., Kondo,C., Honji,Y., Sun,C.R. and Meng,B.Y.
Mol. Gen. Genet. 1989  217(2-3)  185-194
The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of cereals
DB Reference
Gramene ID -
Ontologies
Gene Ontology structural constituent of ribosome( GO:0003735 )
chloroplast( GO:0009507 )
plastid( GO:0009536 )
small ribosomal subunit( GO:0015935 )
membrane( GO:0016020 )
rRNA binding( GO:0019843 )
translation( GO:0006412 )
nucleoid( GO:0009295 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jul 20, 2020

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