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Basic Information
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CGSNL Gene Symbol
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PETD
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Gene Symbol Synonym
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petD, OsPETD
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CGSNL Gene Name
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_
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Gene Name Synonym
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cytochrome b6/f complex subunit IV, cytochrome b/f, cytochrome b6f complex subunit PetD
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Protein Name
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Allele
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Chromosome No.
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Pt
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Explanation
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P0C318, P0C319. AY522329 (isolate 93-11 chloroplast comlete genome), AY522330: AAS46140: Nip099 (cultivar Nipponbare), AY522331 (isolate PA64S). X15901:CAA33978 (Japonica Group chloroplast genome). GU592207:ADD62854 (Japonica chloroplast comlete genome). JN861109, JN861110 (Indica Group chloroplast genome). AP006728 (Oryza nivara chloroplast genome).
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Trait Class
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Biochemical character
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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LOC_Osp1g00650
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RAP ID
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-
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Links
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Organelle Genome
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INSD Accession List
(Test version)
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Map
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Locate(cM)
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References
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Lv J., Shang L., Chen Y., Han Y., Yang X., Xie S., Bai W., Hu M., Wu H., Lei K., Ya'nan Yang, Ge S., Hai Phuong Trinh, Zhang Y., Guo L., Wang Z.
Rice (N Y) 2020 13(1) 25
OsSLC1 Encodes a Pentatricopeptide Repeat Protein Essential for Early Chloroplast Development and Seedling Survival.
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Xu X., Chen Z., Shi Y.F., Wang H.M., He Y., Shi L., Chen T., Wu J.L., Zhang X.B.
BMC Plant Biol. 2018 18(1) 264
Functional inactivation of OsGCNT induces enhanced disease resistance to Xanthomonas oryzae pv. oryzae in rice.
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Liu S., Xue C., Fang Y., Chen G., Peng X., Zhou Y., Chen C., Liu G., Gu M., Wang K., Zhang W., Wu Y., Gong Z.
Mol. Cell Proteomics 2018 17(10) 1922-1936
Global Involvement of Lysine Crotonylation in Protein Modification and Transcription Regulation in Rice.
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Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012 7 (7) E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
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Nock,C.J., Waters,D.L., Edwards,M.A., Bowen,S.G., Rice,N., Cordeiro,G.M. and Henry,R.J.
Plant Biotechnol J. 2011 9(3) 328-333
Chloroplast genome sequences from total DNA for plant identification
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Tang,J., Xia,H., Cao,M., Zhang,X., Zeng,W., Hu,S., Tong,W., Wang,J., Wang,J., Yu,J., Yang,H. and Zhu,L.
Plant Physiol. 2004 135(1) 412-420
A Comparison of Rice Chloroplast Genomes.
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Masood,M.S., Nishikawa,T., Fukuoka,S., Njenga,P.K., Tsudzuki,T. and Kadowaki,K.
Gene 2004 340(1) 133-139
The complete nucleotide sequence of wild rice (Oryza nivara) chloroplast genome: first genome wide comparative sequence analysis of wild and cultivated rice
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Shimada,H. and Sugiura,M.
Nucleic Acids Res. 1991 19(5) 983-995
Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes
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Hiratsuka,J., Shimada,H., Whittier,R., Ishibashi,T., Sakamoto,M., Mori,M., Kondo,C., Honji,Y., Sun,C.R. and Meng,B.Y.
Mol. Gen. Genet. 1989 217(2-3) 185-194
The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of cereals
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity( GO:0045158 )
electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity( GO:0045156 )
respiratory electron transport chain( GO:0022904 )
chloroplast thylakoid membrane( GO:0009535 )
oxidoreductase activity( GO:0016491 )
integral to membrane( GO:0016021 )
photosynthetic electron transport chain( GO:0009767 )
plastid( GO:0009536 )
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Trait Ontology
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-
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Jul 20, 2020
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Update info.