Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol PETE
Gene Symbol Synonym petE, petG
CGSNL Gene Name _
Gene Name Synonym cytochrome b6/f complex subunit V, cytochrome b/f complex subunit 5
Protein Name _
Allele
Chromosome No. Pt
Explanation LOC_Osp1g00540. P0C391, P0C392. AY522329 (isolate 93-11 chloroplast comlete genome), AY522330: AAS46133: Nip082 (cultivar Nipponbare), AY522331 (isolate PA64S). X15901: CAA33967 (Japonica Group chloroplast genome). JN861109, JN861110 (Indica Group chloroplast genome). AP006728 (Oryza nivara chloroplast genome). petG in Masood et al. 2004 (Oryza nivara) and Zhang et al. 2012 (Indica).
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Osp1g00540
RAP ID -
Links Organelle Genome
INSD Accession List
(Test version) 		-
Map
Locate(cM)
References
WANG Zhong-wei, ZHANG Tian-quan, XING Ya-di ZENG Xiao-qin, WANG Ling, LIU Zhong-xian, SHI Jun-qiong, ZHU Xiao-yan, MA Ling, LI Yun-Feng, LING Ying-Hua, SANG Xian-chun, HE Guang-Hua
Journal of Integrative Agriculture 2015  15(5)  944-953
YGL9, encoding the putative chloroplast signal recognition particle 43 kDa protein in rice, is involved in chloroplast development
Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012  7 (7)  E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
Tang,J., Xia,H., Cao,M., Zhang,X., Zeng,W., Hu,S., Tong,W., Wang,J., Wang,J., Yu,J., Yang,H. and Zhu,L.
Plant Physiol. 2004  135(1)  412-420
A Comparison of Rice Chloroplast Genomes.
Masood,M.S., Nishikawa,T., Fukuoka,S., Njenga,P.K., Tsudzuki,T. and Kadowaki,K.
Gene 2004  340(1)  133-139
The complete nucleotide sequence of wild rice (Oryza nivara) chloroplast genome: first genome wide comparative sequence analysis of wild and cultivated rice
Hiratsuka,J., Shimada,H., Whittier,R., Ishibashi,T., Sakamoto,M., Mori,M., Kondo,C., Honji,Y., Sun,C.R. and Meng,B.Y.
Mol. Gen. Genet. 1989  217(2-3)  185-194
The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of cereals
DB Reference
Gramene ID -
Ontologies
Gene Ontology cytochrome b6f complex( GO:0009512 )
chloroplast thylakoid membrane( GO:0009535 )
plastid( GO:0009536 )
photosynthesis( GO:0015979 )
integral to membrane( GO:0016021 )
cytochrome complex assembly( GO:0017004 )
electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity( GO:0045158 )
oxidation reduction( GO:0055114 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Sep 16, 2018

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