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Basic Information
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CGSNL 遺伝子シンボル
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遺伝子シンボルシノニム
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atpA
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CGSNL 遺伝子名
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_
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遺伝子名シノニム
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ATP synthase CF1 alpha chain, ATPase alpha subunit, ATP synthase CF1 alpha subunit
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タンパク質名
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対立遺伝子
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染色体番号
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Pt
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解説
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P0C2Z5, P0C2Z6. AY522329 (isolate 93-11 chloroplast comlete genome), AY522330: AAS46118: Nip046 (cultivar Nipponbare), AY522331 (isolate PA64S). X15901:CAA33993 (Japonica Group chloroplast genome). GU592207:ADD62831 (Japonica chloroplast comlete genome). JN861109, JN861110 (Indica Group chloroplast genome). AP006728 (Oryza nivara chloroplast genome).
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形質クラス
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生化学的性質
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発現
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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LOC_Osp1g00310
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RAP ID
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Links
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Organelle Genome
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INSD Accession List
(Test version)
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マップ
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位置情報(cM)
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文献
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X Liu, P H Cao, Q Q Huang, Y R Yang, D D Tao
Rice (N Y) 2020 13(1) 51
Disruption of a Rice Chloroplast-Targeted Gene OsHMBPP Causes a Seedling-Lethal Albino Phenotype.
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Lin D., Kong R., Chen L., Wang Y., Wu L., Xu J., Piao Z., Lee G., Dong Y.
Sci Rep 2020 10(1) 8518
Chloroplast development at low temperature requires the pseudouridine synthase gene TCD3 in rice.
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L L Liu, J You, Z Zhu, K Y Chen, M M Hu, H Gu, Z W Liu, Z Y Wang, Y H Wang, S J Liu, L M Chen, X Liu, Y L Tian, S R Zhou, L Jiang, J M Wan
Plant Cell Rep. 2020 39(1) 19-33
WHITE STRIPE LEAF8, encoding a deoxyribonucleoside kinase, is involved in chloroplast development in rice.
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Zhang Q., Shen L., Wang Z., Hu G., Ren D., Hu J., Zhu L., Gao Z., Zhang G., Guo L., Zeng D., Qian Q.
Int J Mol Sci 2019 20(18)
OsCAF1, a CRM Domain Containing Protein, Influences Chloroplast Development.
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Xiao H., Xu Y., Ni C., Zhang Q., Zhong F., Huang J., Liu W., Peng L., Zhu Y., Hu J.
J. Exp. Bot. 2018 69(12) 2923-2936
A rice dual-localized pentatricopeptide repeat protein is involved in organellar RNA editing together with OsMORFs.
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Xu X., Chen Z., Shi Y.F., Wang H.M., He Y., Shi L., Chen T., Wu J.L., Zhang X.B.
BMC Plant Biol. 2018 18(1) 264
Functional inactivation of OsGCNT induces enhanced disease resistance to Xanthomonas oryzae pv. oryzae in rice.
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Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012 7 (7) E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
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Nock,C.J., Waters,D.L., Edwards,M.A., Bowen,S.G., Rice,N., Cordeiro,G.M. and Henry,R.J.
Plant Biotechnol J. 2011 9(3) 328-333
Chloroplast genome sequences from total DNA for plant identification
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Tang,J., Xia,H., Cao,M., Zhang,X., Zeng,W., Hu,S., Tong,W., Wang,J., Wang,J., Yu,J., Yang,H. and Zhu,L.
Plant Physiol. 2004 135(1) 412-420
A Comparison of Rice Chloroplast Genomes.
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Masood,M.S., Nishikawa,T., Fukuoka,S., Njenga,P.K., Tsudzuki,T. and Kadowaki,K.
Gene 2004 340(1) 133-139
The complete nucleotide sequence of wild rice (Oryza nivara) chloroplast genome: first genome wide comparative sequence analysis of wild and cultivated rice
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Nakazono,M. and Hirai,A.
Mol. Gen. Genet. 1993 236(2-3) 341-346
Identification of the entire set of transferred chloroplast DNA sequences in the mitochondrial genome of rice
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Shimada,H. and Sugiura,M.
Nucleic Acids Res. 1991 19(5) 983-995
Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes
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Hiratsuka,J., Shimada,H., Whittier,R., Ishibashi,T., Sakamoto,M., Mori,M., Kondo,C., Honji,Y., Sun,C.R. and Meng,B.Y.
Mol. Gen. Genet. 1989 217(2-3) 185-194
The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of cereals
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TextPresso Search
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( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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オントロジー
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Gene Ontology
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stromule( GO:0010319 )
plastoglobule( GO:0010287 )
plastid( GO:0009536 )
plasma membrane ATP synthesis coupled proton transport( GO:0042777 )
defense response to bacterium( GO:0042742 )
thylakoid lumen( GO:0031977 )
ATP hydrolysis coupled proton transport( GO:0015991 )
proton-transporting ATPase activity, rotational mechanism( GO:0046961 )
hydrogen ion transporting ATP synthase activity, rotational mechanism( GO:0046933 )
proton-transporting ATP synthase complex, catalytic core F(1)( GO:0045261 )
ATP synthesis coupled proton transport( GO:0015986 )
ATP binding( GO:0005524 )
zinc ion binding( GO:0008270 )
chloroplast thylakoid membrane( GO:0009535 )
response to cold( GO:0009409 )
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Trait Ontology
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Plant Ontology
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関連系統
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形質画像
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更新日
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2020-10-05 14:10:33.428
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更新情報
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