Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym rig, RPS15, OsRPS15
CGSNL Gene Name _
Gene Name Synonym Rat insulinoma gene, rat insulinoma gene homolog, ribosomal protein S15, 40S ribosomal protein S15, ribosomal protein small subunit 15
Protein Name
Allele
Chromosome No. 7
Explanation LOC_Os07g08660. D10962. P31674. AU031252. D16075.
Trait Class Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK059157
MSU ID LOC_Os07g08660.1
RAP ID Os07g0184300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Saha A., Das S., Moin M., Dutta M., Bakshi A., Madhav M.S., Kirti P.B.
Front Plant Sci 2017  8  1553
Genome-Wide Identification and Comprehensive Expression Profiling of Ribosomal Protein Small Subunit (RPS) Genes and their Comparative Analysis with the Large Subunit (RPL) Genes in Rice.
Moin M., Bakshi A., Madhav M.S., Kirti P.B.
Front Chem 2017  5  97
Expression Profiling of Ribosomal Protein Gene Family in Dehydration Stress Responses and Characterization of Transgenic Rice Plants Overexpressing <i>RPL23A</i> for Water-Use Efficiency and Tolerance to Drought and Salt Stresses.
Yamaguchi,T., Nakayama,K., Hayashi,T., Yazaki,J., Kishimoto,N., Kikuchi,S. and Koike,S.
Biosci. Biotechnol. Biochem. 2004  68(6)  1315-1323
cDNA Microarray Analysis of Rice Anther Genes under Chilling Stress at the Microsporogenesis Stage Revealed Two Genes with DNA Transposon Castaway in the 5'-Flanking Region.
Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994  6(4)  615-624
Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
Kidou,S., Umeda,M., Kato,A. and Uchimiya,H.
Nucleic Acids Res. 1993  21(8)  2013
Plant cDNA homologue to rat insulinoma gene encoding ribosomal protein S15.
Uchimiya,H., Kidou,S., Shimazaki,T., Aotsuka,S., Takamatsu,S., Nishi,R., Hashimoto,H., Matsubayashi,Y., Kidou,N., Umeda,M. and Kato,A.
Plant J. 1992  2(6)  1005-1009
Random sequencing og cDNA librariesreveals a variety of expressed genes in cultured cells of rice (Oryza sativa L.)
DB Reference
Gramene ID -
Ontologies
Gene Ontology RNA binding( GO:0003723 )
structural constituent of ribosome( GO:0003735 )
nucleolus( GO:0005730 )
plasma membrane( GO:0005886 )
translation( GO:0006412 )
cytosolic small ribosomal subunit( GO:0022627 )
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 )
response to abscisic acid stimulus( GO:0009737 )
response to hydrogen peroxide( GO:0042542 )
defense response to bacterium( GO:0042742 )
defense response to fungus( GO:0050832 )
Trait Ontology temperature response trait( TO:0000432 )
abscisic acid sensitivity( TO:0000615 )
drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
oxidative stress( TO:0002657 )
bacterial blight disease resistance( TO:0000175 )
sheath blight disease resistance( TO:0000255 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jul 18, 2018

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