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Basic Information
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CGSNL Gene Symbol
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_
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Gene Symbol Synonym
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cob, cob-1, cob-like, cyt c
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CGSNL Gene Name
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_
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Gene Name Synonym
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apocytochrome b, Cyt b of the Cyt bc 1 complex
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Protein Name
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Allele
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Chromosome No.
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Mt
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Explanation
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LOC_Osm1g00480. X17064. D83009, X53710. P0C523, P0C524. DQ167399 (isolate 93-11 complete mitochondrial genome), DQ167400: AAZ99352 (cultivar Nipponbare), DQ167807 (isolate PA64S). BA000029: BAC19890 (Nipponbare complete mitochondrial genome). JN861111: AER12986 (indica Hassawi complete mitochondrial genome). JF281153: AEZ03723 (indica IR6888 complete mitochondrial genome). cob-like in JN861111.
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Trait Class
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Biochemical character
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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LOC_Osm1g00480
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RAP ID
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-
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Links
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Organelle Genome
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INSD Accession List
(Test version)
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Map
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Locate(cM)
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References
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Xue M., Liu L., Yu Y., Zhu J., Gao H., Wang Y., Wan J.
Rice (N Y) 2019 12(1) 100
Lose-of-Function of a Rice Nucleolus-Localized Pentatricopeptide Repeat Protein Is Responsible for the floury endosperm14 Mutant Phenotypes.
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Chen N., Wang P., Li C., Wang Q., Pan J., Xiao F., Wang Y., Zhang K., Li C., Yang B., Sun C., Deng X.
Plant Cell Physiol. 2018
A single nucleotide mutation of IspE gene participating in the MEP pathway for isoprenoid biosynthesis causes green-revertible yellow leaf phenotype in rice.
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Bentolila,S. and Stefanov,S.
Plant Physiol. 2012 158(2) 996-1017
A reevaluation of rice mitochondrial evolution based on the complete sequence of male-fertile and male-sterile mitochondrial genomes
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Zhang,T., Hu,S., Zhang,G., Pan,L., Zhang,X., Al-Mssallem,I.S. and Yu,J.
PLoS ONE 2012 7 (7) E42041
The Organelle Genomes of Hassawi Rice (Oryza sativa L.) and Its Hybrid in Saudi Arabia: Genome Variation, Rearrangement, and Origins
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Ngangkham U., Parida S.K., De S., Anand Raj Kumar K., Singh A.K., Singh N.K., Mohapatra T.
Molecular Breeding 2010 26(2) 275-292
Genic markers for wild abortive (WA) cytoplasm based male sterility and its fertility restoration in rice
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Tian,X., Zheng,J., Hu,S. and Yu,J.
Plant Physiol. 2006 140(2) 401-410
The Rice Mitochondrial Genomes and Their Variations
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Notsu,Y., Masood,S., Nishikawa,T., Kubo,N., Akiduki,G., Nakazono,M., Hirai,A. and Kadowaki,K.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002 268(4) 434-445
The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants
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Ito, Y., Nakazono, M., Kadowaki, K., Tsutsumi, N .and Hirai, A.
Genes Genet. Syst. 1996 71(2) 85-89
RNA editing of transcripts of the gene for apocytochrome b (cob) in rice mitochondria
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Kaleikau,E.K., Andre,C.P. and Walbot,V.
Curr. Genet. 1992 22(6) 463-470
Structure and expression of the rice mitochondrial apocytochrome b gene (cob-1) and pseudogene (cob-2)
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M Iwahashi, M Nakazono, A Kanno, K Sugino, T Ishibashi, A Hirai
Theor. Appl. Genet. 1992 84(3-4) 275-9
Genetic and physical maps and a clone bank of mitochondrial DNA from rice.
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Kaleikau,E.K., Andre,C.P., Doshi,B. and Walbot,V.
Nucleic Acids Res. 1990 18(2) 372
Sequence of the rice mitochondrial gene for apocytochrome b
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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mitochondrion( GO:0005739 )
mitochondrial inner membrane( GO:0005743 )
electron carrier activity( GO:0009055 )
RNA modification( GO:0009451 )
integral to membrane( GO:0016021 )
oxidoreductase activity( GO:0016491 )
metal ion binding( GO:0046872 )
respiratory chain( GO:0070469 )
respiratory electron transport chain( GO:0022904 )
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Trait Ontology
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-
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Apr 23, 2020
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Update info.