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Basic Information
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CGSNL Gene Symbol
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_
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Gene Symbol Synonym
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cox3, coxIII, cox3a, cox3b, cox3c
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CGSNL Gene Name
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_
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Gene Name Synonym
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cytochrome oxidase subunit 3, mitochondrial respiratory chain complex IV subunit 3, Cytochrome c oxidase subunit 3
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Protein Name
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Allele
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Chromosome No.
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Mt
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Explanation
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LOC_Osm1g00110. X17040. P14852. DQ167399 (isolate 93-11 complete mitochondrial genome), DQ167400: AAZ99391 (cultivar Nipponbare), DQ167807 (isolate PA64S). M74241. JN402178-JN402180 (O. sativa and O. rufipogon). AP011077 (Indica Group mitochondrial DNA, complete genome). BA000029: BAC19853 (Nipponbare complete mitochondrial genome). JN861111: AER12991, JN861112 (indica Hassawi and IR1112 x Hassawi complete mitochondrial genome). JF281153: AEZ03745 (indica IR6888 complete mitochondrial genome). The locations of BA000029: BAC19853 and DQ167400: AAZ99391 (JN861111 and JF281153) are in conflict.
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Trait Class
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Biochemical character
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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LOC_Osm1g00110
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RAP ID
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-
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Links
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Organelle Genome
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INSD Accession List
(Test version)
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Map
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Locate(cM)
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References
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Chen N., Wang P., Li C., Wang Q., Pan J., Xiao F., Wang Y., Zhang K., Li C., Yang B., Sun C., Deng X.
Plant Cell Physiol. 2018
A single nucleotide mutation of IspE gene participating in the MEP pathway for isoprenoid biosynthesis causes green-revertible yellow leaf phenotype in rice.
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Luan J., Liu T., Luo W., Liu W., Peng M., Li W., Dai X., Liang M., Chen L.
Plant Cell Rep. 2013 32(4) 545-54
Mitochondrial DNA genetic polymorphism in thirteen rice cytoplasmic male sterile lines.
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Wei X., Qiao W.H., Chen Y.T., Wang R.S., Cao L.R., Zhang W.X., Yuan N.N., Li Z.C., Zeng H.L., Yang Q.W.
Mol. Ecol. 2012 21(20) 5073-87
Domestication and geographic origin of Oryza sativa in China: insights from multilocus analysis of nucleotide variation of O. sativa and O. rufipogon.
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Fujii S., Kazama T., Yamada M., Toriyama K.
BMC Genomics 2010 11 209
Discovery of global genomic re-organization based on comparison of two newly sequenced rice mitochondrial genomes with cytoplasmic male sterility-related genes
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Ngangkham U., Parida S.K., De S., Anand Raj Kumar K., Singh A.K., Singh N.K., Mohapatra T.
Molecular Breeding 2010 26(2) 275-292
Genic markers for wild abortive (WA) cytoplasm based male sterility and its fertility restoration in rice
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Tian,X., Zheng,J., Hu,S. and Yu,J.
Plant Physiol. 2006 140(2) 401-410
The Rice Mitochondrial Genomes and Their Variations
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Notsu,Y., Masood,S., Nishikawa,T., Kubo,N., Akiduki,G., Nakazono,M., Hirai,A. and Kadowaki,K.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2002 268(4) 434-445
The complete sequence of the rice (Oryza sativa L.) mitochondrial genome: frequent DNA sequence acquisition and loss during the evolution of flowering plants
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Karlovsky,P. and Fartmann,B.
J. Mol. Evol. 1992 34(3) 254-258
Genetic code and phylogenetic origin of oomycetous mitochondria
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Liu,A.W., Narayanan,K.K., Andre,C.P., Kaleikau,E.K. and Walbot,V.
Curr. Genet. 1992 21(6) 507-513
Co-transcription of orf25 and coxIII in rice mitochondria
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Kaleikau,E.K., Andre,C.P. and Walbot,V.
Nucleic Acids Res. 1990 18(2) 371
Sequence of the rice mitochondrial gene for cytochrome oxidase subunit 3
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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cytochrome-c oxidase activity( GO:0004129 )
mitochondrion( GO:0005739 )
mitochondrial inner membrane( GO:0005743 )
integral to membrane( GO:0016021 )
aerobic electron transport chain( GO:0019646 )
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Trait Ontology
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-
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Sep 8, 2019
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Update info.