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Basic Information
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CGSNL Gene Symbol
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MS2
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Gene Symbol Synonym
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OsMS2, OsDPW, DPW, DPW1, OsDPW1, OsFAR2, FAR2
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CGSNL Gene Name
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MALE STERILITY 2
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Gene Name Synonym
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male sterility protein 2, defective pollen wall, Fatty Acyl-CoA Reductase 2
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Protein Name
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FATTY ACYL-COA REDUCTASE 2
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Allele
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dpw, osfar2
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Chromosome No.
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3
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Explanation
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C99490. a homologous gene of Arabidopsis MS2. a member of fatty acid metabolic gene cluster on chromosome 3 (FGC3). fatty acid reductase. Fatty Acyl Carrier Protein Reductase. dpw rice mutants exhibit anther cuticle defects. PO:0030123: panicle inflorescence.
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Trait Class
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Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Reproductive organ - Spikelet, flower, glume, awn
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK121254
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MSU ID
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LOC_Os03g07140.1
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RAP ID
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Os03g0167600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
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Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Yang C., Shen S., Zhan C., Li Y., Zhang R., Lv Y., Yang Z., Zhou J., Shi Y., Liu X., Shi J., Zhang D., Fernie A.R., Luo J.
Nat Commun 2024 15(1) 6663
Variation in a Poaceae-conserved fatty acid metabolic gene cluster controls rice yield by regulating male fertility.
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Zhou D., Ding M., Wen S., Tian Q., Zhang X., Fang Y., Xue D.
Plants (Basel) 2024 13(7)
Characterization of the fatty acyl-CoA Reductase (FAR) Gene Family and Its Response to Abiotic Stress in Rice (<i>Oryza sativa</i> L.).
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Kamara N., Jiao Y., Huang W., Cao L., Zhu L., Zhao C., Huang X., Shivute F.N., Liu X., Wu J., Shahid M.Q.
Front Plant Sci 2023 14 1229870
Comparative cytological and transcriptome analyses of <i>ny2</i> mutant delayed degeneration of tapetal cells and promotes abnormal microspore development in neo-tetraploid rice.
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Han Y., Jiang S.Z., Zhong X., Chen X., Ma C.K., Yang Y.M., Mao Y.C., Zhou S.D., Zhou L., Zhang Y.F., Huang X.H., Zhang H., Li L.G., Zhu J., Yang Z.N.
Plant Biotechnol. J. 2023 21(8) 1659-1670
Low temperature compensates for defective tapetum initiation to restore the fertility of the novel TGMS line OsTMS15.
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Mo Y., Li G., Liu L., Zhang Y., Li J., Yang M., Chen S., Lin Q., Fu G., Zheng D., Ling Y.
Front Plant Sci 2023 14 1121852
<i>OsGRF4AA</i> compromises heat tolerance of developing pollen grains in rice.
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Kamara N., Lu Z., Jiao Y., Zhu L., Wu J., Chen Z., Wang L., Liu X., Shahid M.Q.
BMC Plant Biol. 2022 22(1) 582
An uncharacterized protein NY1 targets EAT1 to regulate anther tapetum development in polyploid rice.
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Zou T., Xiong P., Zhou F., Zhou D., Chen H., Li G., Peng K., Zheng K., Han Y., Zhang K., Zhang X., Yang S., Deng Q., Wang S., Zhu J., Liang Y., Sun C., Yu X., Liu H., Wang L., Li P., Li S.
Plant J. 2022 111(6) 1509-1526
Grass-specific ABERRANT MICROSPORE DEVELOPMENT 1 is required for maintaining pollen fertility in rice.
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Han Y., Zhou S.D., Fan J.J., Zhou L., Shi Q.S., Zhang Y.F., Liu X.L., Chen X., Zhu J., Yang Z.N.
Rice (N Y) 2021 14(1) 4
OsMS188 Is a Key Regulator of Tapetum Development and Sporopollenin Synthesis in Rice.
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Uzair M., Xu D., Schreiber L., Shi J., Liang W., Ki-Hong Jung, Chen M., Luo Z., Zhang Y., YU J., Zhang D.
Plant Physiol. 2020 182(2) 962-976
PERSISTENT TAPETAL CELL2 Is Required for Normal Tapetal Programmed Cell Death and pollen Wall Patterning.
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Zafar S.A., Patil S.B., Uzair M., Fang J., Zhao J., Guo T., Yuan S., Uzair M., Luo Q., Shi J., Schreiber L., Li X.
New Phytol. 2020 225(1) 356-375
DEGENERATED PANICLE AND PARTIAL STERILITY 1 (DPS1) encodes a cystathionine beta-synthase domain containing protein required for anther cuticle and panicle development in rice.
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Chen L., Yuan Y., Wu J., Chen Z., Wang L., Shahid M.Q., Liu X.
Rice (N Y) 2019 12(1) 34
Carbohydrate metabolism and fertility related genes high expression levels promote heterosis in autotetraploid rice harboring double neutral genes.
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Liao P.F., Ouyang J.X., Zhang J.J., Yang L., Wang X., Peng X.J., Wang D., Zhu Y.L., Li S.B.
Plant Mol. Biol. 2019 99(3) 193-204
OsDCL3b affects grain yield and quality in rice.
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Chen L., Deng R., Liu G., Jin J., Wu J., Liu X.
BMC Plant Biol. 2019 19(1) 546
Cytological and transcriptome analyses reveal OsPUB73 defect affects the gene expression associated with tapetum or pollen exine abnormality in rice.
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Peng X., Wang M., Li Y., Yan W., Chang Z., Chen Z., Xu C., Yang C., Xing Wang Deng, Wu J., Tang X.
J Integr Plant Biol 2019
Lectin receptor kinase OsLecRK-S.7 is required for pollen development and male fertility.
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Bai W., Wang P., Hong J., Kong W., Xiao Y., Yu X., Zheng H., You S., Lu J., Lei D., Wang C., Wang Q., Liu S., Liu X., Tian Y., Chen L., Jiang L., Zhao Z., Wu C., Wan J.
Plant Physiol. 2019 181(3) 1223-1238
<i>Earlier Degraded Tapetum1</i> (<i>EDT1</i>) Encodes an ATP-citrate lyase Required for Tapetum Programmed Cell Death.
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Yang Z., Sun L., Zhang P., Zhang Y., Yu P., Liu L., Abbas A., Xiang X., Wu W., Zhan X., Cao L., Cheng S.
Plant J. 2019 99(5) 844-861
TDR INTERACTING PROTEIN 3, encoding a PHD-finger transcription factor, regulates Ubisch bodies and pollen wall formation in rice.
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Yuenyong W., Chinpongpanich A., Comai L., Chadchawan S., Buaboocha T.
BMC Plant Biol. 2018 18(1) 335
Downstream components of the calmodulin signaling pathway in the rice salt stress response revealed by transcriptome profiling and target identification.
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Zou T., Liu M., Xiao Q., Wang T., Chen D., Luo T., Yuan G., Li Q., Zhu J., Liang Y., Deng Q., Wang S., Zheng A., Wang L., Li P., Li S.
Plant Cell Rep. 2018 37(5) 759-773
OsPKS2 is required for rice male fertility by participating in pollen wall formation.
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Ni E., Zhou L., Li J., Jiang D., Wang Z., Zheng S., Qi H., Zhou Y., Wang C., Xiao S., Liu Z., Zhou H., Zhuang C.
Front Plant Sci 2018 9 1217
<i>OsCER1</i> Plays a Pivotal Role in Very-Long-Chain Alkane Biosynthesis and Affects Plastid Development and Programmed Cell Death of Tapetum in Rice (<i>Oryza sativa</i> L.).
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Sun L., Xiang X., Yang Z., Yu P., Wen X., Wang H., Abbas A., Muhammad Khan R., Zhang Y., Cheng S., Cao L.
Int J Mol Sci 2018 19(12)
<i>OsGPAT3</i> Plays a Critical Role in anther wall Programmed Cell Death and pollen Development in Rice.
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Liu Z., Lin S., Shi J., Yu J., Zhu L., Yang X., Zhang D., Liang W.
Plant J. 2017
Rice No pollen 1 (NP1) is required for anther cuticle formation and pollen exine patterning.
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Yang X., Liang W., Chen M., Zhang D., Zhao X., Shi J.
Planta 2017
Rice fatty Acyl-CoA Synthetase OsACOS12 is required for tapetum programmed cell death and male fertility.
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Ko S.S., Li M.J., Lin Y.J., Hsing H.X., Yang T.T., Chen T.K., Jhong C.M., Ku M.S.
Front Plant Sci 2017 8 1258
Tightly Controlled Expression of bHLH142 Is Essential for Timely Tapetal Programmed Cell Death and pollen Development in Rice.
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Zhu X., Yu J., Shi J., Tohge T., Fernie A.R., Meir S., Aharoni A., Xu D., Zhang D., Liang W.
J Integr Plant Biol 2017
The polyketide synthase OsPKS2 is essential for pollen exine and Ubisch body patterning in rice.
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Men X., Shi J., Liang W., Zhang Q., Lian G., Quan S., Zhu L., Luo Z., Chen M., Zhang D.
J. Exp. Bot. 2017 68(3) 513-526
Glycerol-3-Phosphate Acyltransferase 3 (OsGPAT3) is required for anther development and male fertility in rice.
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Pu C.X., Han Y.F., Zhu S., Song F.Y., Zhao Y., Wang C.Y., Zhang Y.C., Yang Q., Wang J., Bu S.L., Sun L.J., Zhang S.W., Zhang S.Q., Sun D.Y., Sun Y.
Plant Cell 2017 29(1) 70-89
The Rice Receptor-Like Kinases DWARF AND RUNTISH SPIKELET1 and 2 Repress Cell Death and Affect Sugar Utilization during Reproductive Development.
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Yu J., Meng Z., Liang W., Behera S., Kudla J., Tucker M.R., Luo Z., Chen M., Xu D., Zhao G., Wang J., Zhang S., Kim Y.J., Zhang D.
Plant Physiol. 2016 172(3) 1772-1786
A Rice Ca2+ binding protein Is Required for Tapetum Function and pollen Formation.
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Zhao S., Zhao L., Liu F., Wu Y., Zhu Z., Sun C., Tan L.
J Integr Plant Biol 2016 58(12) 983-996
NARROW AND ROLLED LEAF 2 regulates leaf shape, male fertility, and seed size in rice.
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Cao H., Li X., Wang Z., Ding M., Sun Y., Dong F., Chen F., Liu L., Doughty J., Li Y., Liu Y.X.
Plant Physiol. 2015 168(4) 1389-405
histone H2B Monoubiquitination Mediated by HISTONE MONOUBIQUITINATION1 and HISTONE MONOUBIQUITINATION2 Is Involved in Anther Development by Regulating Tapetum Degradation-Related Genes in Rice.
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Quilichini T.D., Grienenberger E., Douglas C.J.
Phytochemistry 2014
The biosynthesis, composition and assembly of the outer pollen wall: A tough case to crack.
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Shi J. , Tan H. , Yu X.H. , Liu Y. , Liang W. , Ranathunge K. , Franke R.B. , Schreiber L. , Wang Y. , Kai G. , Shanklin J. , Ma H. , Zhang D.
Plant Cell 2011 23(6) 2225-46
Defective Pollen Wall Is Required for Anther and Microspore Development in Rice and Encodes a Fatty Acyl Carrier Protein Reductase.
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Aya K., Suzuki G., Suwabe K., Hobo T., Takahashi H., Shiono K., Yano K., Tsutsumi N., Nakazono M., Nagamura Y., Matsuoka M., Watanabe M.
PLoS ONE 2011 6(10) e26162
Comprehensive network analysis of anther-expressed genes in rice by the combination of 33 laser microdissection and 143 spatiotemporal microarrays.
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Da-Sheng Zhang, Wan-Qi Liang, Yuan Z., Li N., Shi J., Wang J., Yu-Min Liu, Wen-Juan Yu, Da-Bing Zhang
Mol Plant 2008 1(4) 599-610
Tapetum degeneration retardation is critical for aliphatic metabolism and gene regulation during rice pollen development.
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Yamaguchi,T., Nakayama,K., Hayashi,T., Yazaki,J., Kishimoto,N., Kikuchi,S. and Koike,S.
Biosci. Biotechnol. Biochem. 2004 68(6) 1315-1323
cDNA Microarray Analysis of Rice Anther Genes under Chilling Stress at the Microsporogenesis Stage Revealed Two Genes with DNA Transposon Castaway in the 5'-Flanking Region.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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tapetal layer development( GO:0048658 )
pollen development( GO:0009555 )
floral organ development( GO:0048437 )
cutin biosynthetic process( GO:0010143 )
plastid( GO:0009536 )
response to abscisic acid stimulus( GO:0009737 )
response to osmotic stress( GO:0006970 )
response to water deprivation( GO:0009414 )
response to cold( GO:0009409 )
inflorescence development( GO:0010229 )
chloroplast( GO:0009507 )
response to heat( GO:0009408 )
pollen wall assembly( GO:0010208 )
pollen exine formation( GO:0010584 )
fatty acyl-CoA reductase (alcohol-forming) activity( GO:0080019 )
anther development( GO:0048653 )
sporopollenin biosynthetic process( GO:0080110 )
response to salt stress( GO:0009651 )
response to hydrogen peroxide( GO:0042542 )
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Trait Ontology
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temperature response trait( TO:0000432 )
anther shape( TO:0000214 )
male sterility( TO:0000437 )
salt tolerance( TO:0006001 )
oxidative stress( TO:0002657 )
heat tolerance( TO:0000259 )
inflorescence development trait( TO:0000621 )
cold tolerance( TO:0000303 )
drought tolerance( TO:0000276 )
osmotic response sensitivity( TO:0000095 )
abscisic acid sensitivity( TO:0000615 )
grain yield( TO:0000396 )
floral organ development trait( TO:0006022 )
anther length( TO:0000531 )
anther color( TO:0000187 )
pollen abortion type( TO:0000218 )
grain yield per plant( TO:0000449 )
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Plant Ontology
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anther development stage( PO:0001004 )
inflorescence( PO:0009049 )
inflorescence development stage( PO:0001083 )
cutin( PO:0025385 )
pollen development stage( PO:0001007 )
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Related Strains
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Phenotype images
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Last updated
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Nov 21, 2024
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Update info.