Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym OsLTP1.18, OsLTP1, nsLTP1, a15, OsLtpI.18
CGSNL Gene Name _
Gene Name Synonym non-specific lipid transfer protein 1.18, lipid transfer protein 1.18, type 1 non-specific lipid transfer protein 18, nonspecific lipid transfer protein-1, lipid transfer protein a15
Protein Name
Allele
Chromosome No. 12
Explanation Q0IQK9, A2ZHF1. Y08691, AF017360. PDB codes: 1rzl, 1uva, 1uvb, 1uvc. X83435. a class II LTP (Vignols et al. 1997). D15678. Phospholipid transfer protein homolog. LOC_Os12g02320.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os12g02320.1
RAP ID Os12g0115100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Wang H.W., Hwang S.G., Karuppanapandian T., Liu A., Kim W., Jang C.S.
DNA Res. 2012  19(2)  179-94
Insight into the Molecular Evolution of Non-Specific Lipid Transfer Proteins via Comparative Analysis Between Rice and Sorghum.
Monika M Edstam, Viitanen L., Tiina A Salminen, Edqvist J.
Mol Plant 2011  4(6)  947-64
Evolutionary history of the non-specific lipid transfer proteins.
Zhang D,Liang W,Yin C,Zong J,Gu F,Zhang D
Plant Physiol. 2010  154(1)  149-62
OsC6, encoding a lipid transfer protein, is required for postmeiotic anther development in rice.
Boutrot F., Chantret N., Marie-Françoise Gautier
BMC Genomics 2008  9  86
Genome-wide analysis of the rice and Arabidopsis non-specific lipid transfer protein (nsLtp) gene families and identification of wheat nsLtp genes by EST data mining.
Hui-Chun Cheng, Pei-Tsung Cheng, Peng P., Ping-Chiang Lyu, Yuh-Ju Sun
Protein Sci. 2004  13(9)  2304-15
Lipid binding in rice nonspecific lipid transfer protein-1 complexes from Oryza sativa.
Samuel D., Yaw-Jen Liu, Chao-Sheng Cheng, Ping-Chiang Lyu
J. Biol. Chem. 2002  277(38)  35267-73
Solution structure of plant nonspecific lipid transfer protein-2 from rice (Oryza sativa).
Lee,M.C., Kim,Y.H., Yun,D.W., Ma,B.C., Nahm,B.H. and Eun,M.Y.
Plant Physiol. 1999  120(1)  339
Cloning and Sequence Analysis of cDNAs Encoding Lipid-Transfer Proteins (Accession Nos. Y08691, AF017358, AF017359, AF017360, and AF017361) from Rice (PGR 99-061)
Vignols,F., Wigger,M., Garcia-Garrido,J.M., Grellet,F., Kader,J.C. and Delseny,M.
Gene 1997  195(2)  177-186
Rice lipid transfer protein (LTP) genes belong to a complex multigene family and are differentially regulated.
Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994  6(4)  615-624
Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
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DB Reference
Gramene ID -
Ontologies
Gene Ontology lipid transport( GO:0006869 )
lipid binding( GO:0008289 )
response to wounding( GO:0009611 )
Trait Ontology -
Plant Ontology plant cuticle( PO:0000022 )
Related Strains
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Phenotype images
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Last updated
Feb 9, 2016


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