Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | LTP1.15 |
| Gene Symbol Synonym | OsLTP1.15, OsLtp1.15, OsLTPL23, LTPL23 |
| CGSNL Gene Name | LIPID TRANSFER PROTEIN 1.15 |
| Gene Name Synonym | non-specific lipid transfer protein 1.15, lipid transfer protein 1.15, type 1 non-specific lipid transfer protein 15, Lipid transfer protein-like 23 |
| Protein Name | LIPID TRANSFER PROTEIN 1.15 |
| Allele | osltpl23, osltpl23-1, osltpl23-2, osltpl23-3, osltpl23-4 |
| Chromosome No. | 12 |
| Explanation | O65091. AF051369. D22795. Phospholipid transfer protein. GO:0090351: seedling development. TO:0000949: seedling growth and development trait. GO:2000882: negative regulation of starch catabolic process. |
| Trait Class |
Biochemical character
Tolerance and resistance - Stress tolerance Character as QTL - Plant growth activity Character as QTL - Germination |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK073466
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| MSU ID |
LOC_Os12g02290.1
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| RAP ID |
Os12g0114500 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Li Q., Zhai W., Wei J., Jia Y.
Front Genet 2023 14 1111318 Rice lipid transfer protein, OsLTPL23, controls seed germination by regulating starch-sugar conversion and ABA homeostasis.
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Wang H.W., Hwang S.G., Karuppanapandian T., Liu A., Kim W., Jang C.S.
DNA Res. 2012 19(2) 179-94 Insight into the Molecular Evolution of Non-Specific Lipid Transfer Proteins via Comparative Analysis Between Rice and Sorghum.
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Monika M Edstam, Viitanen L., Tiina A Salminen, Edqvist J.
Mol Plant 2011 4(6) 947-64 Evolutionary history of the non-specific lipid transfer proteins.
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Boutrot F., Chantret N., Marie-Françoise Gautier
BMC Genomics 2008 9 86 Genome-wide analysis of the rice and Arabidopsis non-specific lipid transfer protein (nsLtp) gene families and identification of wheat nsLtp genes by EST data mining.
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Liu,K.H. and Lin,T.Y.
Plant Physiol. 1998 117(1) 333 Cloning of a cDNA encoding a lipid-transfer protein from rice (Accession No. AF051369) (PGR98-085)
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Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994 6(4) 615-624 Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
response to abscisic acid stimulus( GO:0009737 )
starch catabolic process( GO:0005983 ) alpha-amylase inhibitor activity( GO:0015066 ) regulation of carbohydrate metabolic process( GO:0006109 ) nucleus( GO:0005634 ) plasma membrane( GO:0005886 ) abscisic acid metabolic process( GO:0009687 ) abscisic acid mediated signaling( GO:0009738 ) seed germination( GO:0009845 ) lipid transport( GO:0006869 ) lipid binding( GO:0008289 ) response to wounding( GO:0009611 ) response to water deprivation( GO:0009414 ) response to cold( GO:0009409 ) |
| Trait Ontology |
drought tolerance( TO:0000276 )
cold tolerance( TO:0000303 ) abscisic acid content( TO:0002667 ) seedling vigor( TO:0000280 ) seed viability( TO:0000345 ) germination rate( TO:0000430 ) total soluble sugar content( TO:0000340 ) starch content( TO:0000696 ) abscisic acid sensitivity( TO:0000615 ) |
| Plant Ontology |
plant embryo( PO:0009009 )
0 seed germination stage( PO:0007057 ) seed imbibition stage( PO:0007022 ) |
| Related Strains | |
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| Phenotype images | |
| - | |
| Last updated | |
| Jul 7, 2023 | |
