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Basic Information
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CGSNL Gene Symbol
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SET33
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Gene Symbol Synonym
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OsSET33, OsSDG723, SDG723, OsTrx1, Trx1, OsTrx1/SDG723, DLN219, OsDLN219
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CGSNL Gene Name
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SET PROTEIN 33
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Gene Name Synonym
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SET protein 33, Trithorax1, TRITHORAX-like protein OsTrx1, SET domain group protein 723, DLN repressor 219, DLN motif protein 219
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Protein Name
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SET PROTEIN 33
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Allele
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ostrx1, ostrx1-2, ostrx1-3
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Chromosome No.
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9
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Explanation
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GO:0035556:intracellular signal transduction. an ortholog of Arabidopsis Trithorax protein1 (ATX1). OsTrx1 functions as a negative regulator of Ghd7, independently from Ehd3 and Hd17/Ef7/OsELF3-1 (Choi et al. 2014).
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Trait Class
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Biochemical character
Reproductive organ - Heading date
Reproductive organ - Panicle, Mode of branching
Reproductive organ - Spikelet, flower, glume, awn
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK065095
AK074022
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MSU ID
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LOC_Os09g04890.1
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RAP ID
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Os09g0134500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Huang Y., Liu J., Cheng L., Xu D., Liu S., Hu H., Ling Y., Yang R., Zhang Y.
Plants (Basel) 2024 13(17)
Genome-Wide Analysis of the Histone Modification Gene (<i>HM</i>) Family and Expression Investigation during Anther Development in Rice (<i>Oryza sativa</i> L.).
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Sun C., Li D., Gao Z., Gao L., Shang L., Wang M., Qiao J., Ding S., Li C., Geisler M., Jiang D., Qi Y., Qian Q.
J Integr Plant Biol 2022 64(1) 118-134
OsRLR4 binds to the OsAUX1 promoter to negatively regulate primary root development in rice.
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Abbai R., Singh V.K., Nachimuthu V.V., Sinha P., Selvaraj R., Vipparla A.K., Singh A.K., Singh U.M., Varshney R.K., Kumar A.
Plant Biotechnol. J. 2019
Haplotype analysis of key genes governing grain yield and quality traits across 3K RG panel reveals scope for the development of tailor-made rice with enhanced genetic gains.
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Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019 20(7)
Analysis of Rice Proteins with DLN repressor Motif/S.
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Jiang P., Wang S., Jiang H., Cheng B., Wu K., Ding Y.
Plant Physiol. 2018 176(4) 2761-2771
The COMPASS-Like Complex Promotes Flowering and Panicle Branching in Rice.
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Jiang P., Wang S., Zheng H., Li H., Zhang F., Su Y., Xu Z., Lin H., Qian Q., Ding Y.
New Phytol. 2018 219(1) 422-435
SIP1 participates in regulation of flowering time in rice by recruiting OsTrx1 to Ehd1.
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Choi S.C., Lee S., Kim S.R., Lee Y.S., Liu C., Cao X., An G.
Plant Physiol. 2014 164(3) 1326-37
Trithorax group protein Oryza sativa Trithorax1 controls flowering time in rice via interaction with early heading date3.
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Lu Z., Huang X., Ouyang Y., Yao J.
PLoS ONE 2013 8(6) e65426
Genome-wide identification, phylogenetic and co-expression analysis of OsSET gene family in rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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pollen coat( GO:0070505 )
anther development( GO:0048653 )
nucleus( GO:0005634 )
cytoplasm( GO:0005737 )
plasma membrane( GO:0005886 )
long-day photoperiodism, flowering( GO:0048574 )
chromatin organization( GO:0006325 )
zinc ion binding( GO:0008270 )
regulation of flower development( GO:0009909 )
specification of floral organ identity( GO:0010093 )
phosphatidylinositol-5-phosphate binding( GO:0010314 )
histone methyltransferase activity (H3-K4 specific)( GO:0042800 )
inflorescence development( GO:0010229 )
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Trait Ontology
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flowering time( TO:0002616 )
days to heading( TO:0000137 )
secondary branch number( TO:0000557 )
grain number( TO:0002759 )
inflorescence development trait( TO:0000621 )
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Plant Ontology
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inflorescence development stage( PO:0001083 )
anther( PO:0009066 )
anther development stage( PO:0001004 )
pollen development stage( PO:0001007 )
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Jan 14, 2025
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Update info.