Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | PHS1 |
| Gene Symbol Synonym | OsSET20, SET20, OsSDG703, SDG703, OsSUVH5, SUVH5, OsPHS1 |
| CGSNL Gene Name | PLANTHOPPER SUSCEPTIBLE 1 |
| Gene Name Synonym | SET protein 20, SUVH Histone Methyltransferase 5, planthopper susceptible 1 |
| Protein Name | SET DOMAIN GROUP PROTEIN 703 |
| Allele | phs1 |
| Chromosome No. | 4 |
| Explanation | a rice homolog of Su(var)3-9. GO:1900366: negative regulation of defense response to insect. GO:0140426: pathogen-associated molecular pattern receptor signaling pathway. |
| Trait Class |
Biochemical character
Tolerance and resistance - Insect resistance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK066297
|
| MSU ID |
LOC_Os04g45990.1
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| RAP ID |
Os04g0544100 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Huang Y., Liu J., Cheng L., Xu D., Liu S., Hu H., Ling Y., Yang R., Zhang Y.
Plants (Basel) 2024 13(17) Genome-Wide Analysis of the Histone Modification Gene (<i>HM</i>) Family and Expression Investigation during Anther Development in Rice (<i>Oryza sativa</i> L.).
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Wen P., He J., Zhang Q., Qi H., Zhang A., Liu D., Sun Q., Wang Y., Li Q., Wang W., Chen Z., Wang Y., Liu Y., Wan J.
Int J Mol Sci 2023 24(16) SET domain group 703 Regulates Planthopper Resistance by Suppressing the Expression of Defense-Related Genes.
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Lu Z., Huang X., Ouyang Y., Yao J.
PLoS ONE 2013 8(6) e65426 Genome-wide identification, phylogenetic and co-expression analysis of OsSET gene family in rice.
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Fu-Jun Qin, Qian-Wen Sun, Li-Min Huang, Xiang-Song Chen, Dao-Xiu Zhou
Mol Plant 2010 3(4) 773-82 Rice SUVH histone methyltransferase genes display specific functions in chromatin modification and retrotransposon repression.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
nucleus( GO:0005634 )
chromosome( GO:0005694 ) zinc ion binding( GO:0008270 ) histone-lysine N-methyltransferase activity( GO:0018024 ) histone methyltransferase activity (H3-K9 specific)( GO:0046974 ) histone H3-K9 methylation( GO:0051567 ) defense response to insect( GO:0002213 ) innate immune response-activating signal transduction( GO:0002758 ) |
| Trait Ontology |
insect damage resistance( TO:0000261 )
|
| Plant Ontology |
root( PO:0009005 )
stem( PO:0009047 ) leaf sheath( PO:0020104 ) leaf( PO:0025034 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Jan 14, 2025 | |
