Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol PME6
Gene Symbol Synonym OsPME6, OsPME1
CGSNL Gene Name PECTIN METHYLESTERASE 6
Gene Name Synonym pectin methylesterase 6
Protein Name PECTIN METHYLESTERASE 6
Allele
Chromosome No. 1
Explanation OsPME1 in Fang et al. 2016, Leng et al. 2017, Hasegawa et al. 2023.
Trait Class Biochemical character
Vegetative organ - Leaf
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Expression
Sequence/Locus
cDNA Accession No. AK109763
MSU ID LOC_Os01g57854.1
RAP ID Os01g0788400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Hasegawa K., Ichikawa A., Takeuchi H., Nakamura A., Iwai H.
Plants (Basel) 2023  12(8) 
Maintenance of Methyl-Esterified Pectin Level in pollen Mother-Cell Stages Is Required for Microspore Development.
Bang S.W., Lee D.K., Jung H., Chung P.J., Kim Y.S., Choi Y.D., Suh J.W., Kim J.K.
Plant Biotechnol. J. 2018   
Overexpression of OsTF1L, a rice HD-Zip transcription factor, promotes lignin biosynthesis and stomatal closure that improves drought tolerance.
Leng Y., Yang Y., Ren D., Huang L., Dai L., Wang Y., Chen L., Tu Z., Gao Y., Li X., Zhu L., Hu J., Zhang G., Gao Z., Guo L., Kong Z., Lin Y., Qian Q., Zeng D.
Plant Physiol. 2017   
A rice pectate lyase-LIKE gene is required for plant growth and leaf senescence.
Fang C., Zhang H., Wan J., Wu Y., Li K., Jin C., Chen W., Wang S., Wang W., Zhang H., Zhang P., Zhang F., Qu L., Liu X., Zhou D.X., Luo J.
Mol Plant 2016   
Control of leaf senescence by a MeOH-Jasmonates Cascade That Is Epigenetically Regulated by OsSRT1 in Rice.
Yang X.Y., Zeng Z.H., Yan J.Y., Fan W., Bian H.W., Zhu M.Y., Yang J.L., Zheng S.J.
Physiol Plant 2013  148(4)  502-11
Association of specific pectin methylesterases with Al-induced root elongation inhibition in rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology enzyme inhibitor activity( GO:0004857 )
cell wall( GO:0005618 )
plasma membrane( GO:0005886 )
pectinesterase activity( GO:0030599 )
cell wall modification( GO:0042545 )
leaf senescence( GO:0010150 )
chlorophyll catabolic process( GO:0015996 )
negative regulation of catalytic activity( GO:0043086 )
aspartyl esterase activity( GO:0045330 )
pectin metabolic process( GO:0045488 )
methanol biosynthetic process( GO:0046169 )
microsporogenesis( GO:0009556 )
plant-type cell wall organization( GO:0009664 )
cell wall pectin metabolic process( GO:0052546 )
anther development( GO:0048653 )
pollen development( GO:0009555 )
Trait Ontology jasmonic acid content( TO:0002668 )
leaf senescence( TO:0000249 )
pollen free( TO:0000245 )
male sterility( TO:0000437 )
anther color( TO:0000187 )
anther length( TO:0000531 )
anther shape( TO:0000214 )
Plant Ontology anther development stage( PO:0001004 )
pollen development stage( PO:0001007 )
C callose wall formation in pollen mother cells stage( PO:0001008 )
Related Strains
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Phenotype images
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Last updated
Aug 29, 2023

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