Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol MIR396E
Gene Symbol Synonym miR396e, osa-miR396e, osa-MIR396eosa-miR396e-3p osa-miR396e-5p
CGSNL Gene Name MICRORNA396E
Gene Name Synonym MICRORNA396e, osa-miRNA396e
Protein Name _
Allele
Chromosome No. 4
Explanation miRBASE accession: MI0001703. LM381739, LM379525. target genes: Os06g0708700 and Os11g0129700.
Trait Class Tolerance and resistance - Disease resistance
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Hu L., Yang D., Wang H., Du X., Lu L., Li J., Xia M., Qi H., Zha W., Wu Y., Mou T., You A., Wan B.
BMC Plant Biol. 2026  26(1) 
Identification and analysis of microRNAs responsible for brown planthopper resistance in BPH14 and BPH15 pyramiding rice.
Chen X., Jiang L., Zheng J., Chen F., Wang T., Wang M., Tao Y., Wang H., Hong Z., Huang Y., Huang R.
J. Exp. Bot. 2019  70(15)  3851-3866
A missense mutation in Large grain size 1 increases grain size and enhances cold tolerance in rice.
Chandran V., Wang H., Gao F., Cao X.L., Chen Y.P., Li G.B., Zhu Y., Yang X.M., Zhang L.L., Zhao Z.X., Zhao J.H., Wang Y.G., Li S., Fan J., Li Y., Zhao J.Q., Li S.Q., Wang W.M.
Front Plant Sci 2018  9  1999
MiR396-<i>OsGRF</i>s Module Balances Growth and Rice blast disease-Resistance.
Zhang D., Liu M., Tang M., Dong B., Wu D., Zhang Z., Zhou B.
Plant Sci. 2015  237  24-32
Repression of microRNA biogenesis by silencing of OsDCL1 activates the basal resistance to Magnaporthe oryzae in rice.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Sunkar R., Girke T., Pradeep Kumar Jain, Jian-Kang Zhu
Plant Cell 2005  17(5)  1397-411
Cloning and characterization of microRNAs from rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology gene silencing by miRNA( GO:0035195 )
micro-ribonucleoprotein complex( GO:0035068 )
RNA-induced silencing complex( GO:0016442 )
mRNA cleavage( GO:0006379 )
defense response to insect( GO:0002213 )
defense response to fungus( GO:0050832 )
response to cold( GO:0009409 )
Trait Ontology blast disease( TO:0000074 )
cold tolerance( TO:0000303 )
brown planthopper resistance( TO:0000424 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 5, 2026

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