Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol MIR5788
Gene Symbol Synonym miR5788, osa-miR5788, osa-MIR5788, NolmiR-3
CGSNL Gene Name MICRORNA5788
Gene Name Synonym MICRORNA5788, osa-miRNA5788
Protein Name _
Allele
Chromosome No. 3
Explanation miRBASE accession: MI0019798. predicted target(s): LTP family protein, SET domain. target: LOC_Os12g02330 (non-specific lipid-transfer protein, nsLTP). The target (nsLTP) was negatively regulated by NolmiR-3, indicating that the NolmiR-3 may play an important role in development and defense in plants (Yang et al. 2014).
Trait Class Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Kansal S., Panwar V., Mutum R.D., Raghuvanshi S.
Front Plant Sci 2021  12  720009
Investigations on Regulation of MicroRNAs in Rice Reveal [Ca2+]cyt Signal Transduction Regulated MicroRNAs.
Yang J., Zhang H.M., Liu X.Y., Li J., Lv M.F., Li P.P., Dai L.Y., Chen J.P.
Gene 2014  548(2)  285-93
Identification of 23 novel conserved microRNAs in three rice cultivars.
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
DB Reference
Gramene ID -
Ontologies
Gene Ontology mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
gene silencing by miRNA( GO:0035195 )
response to water deprivation( GO:0009414 )
calcium-mediated signaling( GO:0019722 )
Trait Ontology drought tolerance( TO:0000276 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
May 20, 2022

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