Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol MIR2118F
Gene Symbol Synonym miR2118f, osa-miR2118f, osa-MIR2118f
CGSNL Gene Name MICRORNA2118F
Gene Name Synonym MICRORNA2118f, osa-miRNA2118f
Protein Name _
Allele
Chromosome No. 4
Explanation miRBASE accession: MI0011256.
Trait Class Reproductive organ - Inflorescence
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Female sterility
Reproductive organ - Spikelet, flower, glume, awn
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Araki S., Le N.T., Koizumi K., Villar-Briones A., Nonomura K.I., Endo M., Inoue H., Saze H., Komiya R.
Nat Commun 2020  11(1)  3115
miR2118-dependent U-rich phasiRNA production in rice anther wall development.
Ta K.N., Sabot F., Adam H., Vigouroux Y., De Mita S., Ghesquière A., Do N.V., Gantet P., Jouannic S.
Rice (N Y) 2016  9(1)  10
miR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species.
Komiya R., Ohyanagi H., Niihama M., Watanabe T., Nakano M., Kurata N., Nonomura K.I.
Plant J. 2014  78(3)  385-97
Rice germline-specific Argonaute MEL1 protein binds to phasiRNAs generated from more than 700 lincRNAs.
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
DB Reference
Gramene ID -
Ontologies
Gene Ontology mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
gene silencing by miRNA( GO:0035195 )
inflorescence development( GO:0010229 )
flower development( GO:0009908 )
male gamete generation( GO:0048232 )
anther development( GO:0048653 )
Trait Ontology inflorescence development trait( TO:0000621 )
flower development trait( TO:0000622 )
male sterility( TO:0000437 )
female sterility( TO:0000358 )
Plant Ontology inflorescence development stage( PO:0001083 )
hypodermis( PO:0005051 )
stamen( PO:0009029 )
flower development stage( PO:0007615 )
epidermis( PO:0005679 )
pollen sac( PO:0025277 )
spikelet meristem( PO:0006327 )
anther development stage( PO:0001004 )
Related Strains
-
Phenotype images
-
Last updated
Sep 14, 2020

/rice/oryzabase