Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol MIR1866
Gene Symbol Synonym miR1866, osa-miR1866, osa-MIR1866, Osa-miR1866-5p, Osa-miR1866-3p
CGSNL Gene Name MICRORNA1866
Gene Name Synonym MICRORNA1866, osa-miRNA1866
Protein Name _
Allele
Chromosome No. 3
Explanation miRBASE accession: MI0008267. the target genes of osa-miR1866-3p: LOC_Os09g21110 and LOC_Os02g44360. PO:0030104: caryopsis fruit.
Trait Class Seed - Physiological traits - Storage substances
Tolerance and resistance - Stress tolerance
Character as QTL - Grain quality
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Payne D., Li Y., Govindan G., Kumar A., Thomas J., Addo-Quaye CA., Pereira A., Sunkar R.
Int J Mol Sci 2023  24(14) 
High Daytime Temperature Responsive MicroRNA Profiles in Developing Grains of Rice Varieties with Contrasting Chalkiness.
Huo C., Zhang B., Wang R.
Plant Signal Behav 2022  17(1)  2004035
Research progress on plant noncoding RNAs in response to low-temperature stress.
Cai Y., Zhang W., Fu Y., Shan Z., Xu J., Wang P., Kong F., Jin J., Yan H., Ge X., Wang Y., You X., Chen J., Li X., Chen W., Chen X., Ma J., Tang X., Zhang J., Bao Y., Jiang L., Wang H., Wan J.
Plant Biotechnol. J. 2022  20(7)  1387-1401
Du13 encodes a C2 H2 zinc-finger protein that regulates Wxb pre-mRNA splicing and microRNA biogenesis in rice endosperm.
Mondal T.K., Ganie S.A.
Gene 2014  535  204-209
Identification and characterization of salt responsive miRNA-SSR markers in rice (oryza sativa)
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Zhu,Q.H., Spriggs,A., Matthew,L., Fan,L., Kennedy,G., Gubler,F. and Helliwell,C.
Genome Res. 2008  18(9)  1456-1465
A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
DB Reference
Gramene ID -
Ontologies
Gene Ontology mRNA cleavage( GO:0006379 )
gene silencing by miRNA( GO:0035195 )
RNA-induced silencing complex( GO:0016442 )
response to cold( GO:0009409 )
response to heat( GO:0009408 )
micro-ribonucleoprotein complex( GO:0035068 )
Trait Ontology salt sensitivity( TO:0000429 )
cold tolerance( TO:0000303 )
heat tolerance( TO:0000259 )
chalky endosperm( TO:0000266 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Nov 13, 2023

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