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Basic Information
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CGSNL 遺伝子シンボル
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MIR820A
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遺伝子シンボルシノニム
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miR820a, osa-miR820a, osa-MIR820a, OsmiR820a
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CGSNL 遺伝子名
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MICRORNA820A
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遺伝子名シノニム
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MICRORNA820a, osa-miRNA820a
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タンパク質名
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_
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対立遺伝子
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染色体番号
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1
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解説
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miRBASE accession: MI0005263. target: Os03g0110800 (DRM2). LM380058. predicted targets for Osa-miR820: Os03g0110800, Os11g0127000, Os10g0572400, Os02g0612800, Os05g0548100, Os02g0666200.
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形質クラス
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耐性、抵抗性 - ストレス耐性
その他
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発現
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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-
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RAP ID
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-
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Links
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INSD Accession List
(Test version)
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Zhou J., Deng K., Cheng Y., Zhong Z., Tian L., Tang X., Tang A., Zheng X., Zhang T., Qi Y., Zhang Y.
Front Plant Sci 2017 8 1598
CRISPR-Cas9 Based Genome Editing Reveals New Insights into MicroRNA Function and Regulation in Rice.
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Sharma N., Tripathi A., Sanan-Mishra N.
Front Plant Sci 2015 6 333
Profiling the expression domains of a rice-specific microRNA under stress.
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Wei L.a b, Gu L.a, Song X.a, Cui X.a b, Lu Z.a, Zhou M.a, Wang L.a, Hu F.c, Zhai J.d e, Meyers B.C.d e, Cao X.a
Proc. Natl. Acad. Sci. U.S.A. 2014 111 3877-3882
Dicer-like 3 produces transposable element-associated 24-nt siRNAs that control agricultural traits in rice
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Nosaka M., Ono A., Ishiwata A., Shimizu-Sato S., Ishimoto K., Noda Y., Sato Y.
Genes and Genetic Systems 2013 88 105-112
Expression of the rice microRNA miR820 is associated with epigenetic modifications at its own locus
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Nosaka M., Itoh J., Nagato Y., Ono A., Ishiwata A., Sato Y.
PLoS Genet. 2012 8(9) e1002953
Role of transposon-derived small RNAs in the interplay between genomes and parasitic DNA in rice.
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Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011 39 D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
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Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011 23(12) 4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
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Wu L., Zhou H., Zhang Q., Zhang J., Ni F., Liu C., Qi Y.
Mol. Cell 2010 38(3) 465-75
DNA methylation mediated by a microRNA pathway.
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Guo,X., Gui,Y., Wang,Y., Zhu,Q.H., Helliwell,C. and Fan,L.
BMC Genomics. 2008 9(1) 454
Selection and mutation on microRNA target sequences during rice evolution
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TextPresso Search
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Search textpresso for MIR820A
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
gene silencing by miRNA( GO:0035195 )
response to heat( GO:0009408 )
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 )
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Trait Ontology
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salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
heat tolerance( TO:0000259 )
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Plant Ontology
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関連系統
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形質画像
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更新日
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2018-02-24 10:49:22.34
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更新情報
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