Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol MIR171F
Gene Symbol Synonym miR171f, osa-miR171f, osa-miR171f-3p osa-miR171f-5p
CGSNL Gene Name MICRORNA171F
Gene Name Synonym MICRORNA171f
Protein Name _
Allele
Chromosome No. 3
Explanation miRBASE accession: MI0001137. target gene(s): GRAS transcription factors. AY551249.LM379343 LM383075
Trait Class Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Um T., Choi J., Park T., Chung P.J., Jung S.E., Shim J.S., Kim Y.S., Choi I.Y., Park S.C., Oh S.J., Seo J.S., Kim J.K.
Plant Direct 2022  6(1)  e374
Rice <i>microRNA171f/SCL6</i> module enhances drought tolerance by regulation of flavonoid biosynthesis genes.
Devi S.J., Madhav M.S., Kumar G.R., Goel A.K., Umakanth B., Jahnavi B., Viraktamath B.C.
Gene 2013  531(1)  15-22
Identification of abiotic stress miRNA transcription factor binding motifs (TFBMs) in rice.
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Li,Y., Li,W. and Jin,Y.X.
Acta Biochim. Biophys. Sin. (Shanghai) 2005  37 (2)  75-87
Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
DB Reference
Gramene ID -
Ontologies
Gene Ontology mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
gene silencing by miRNA( GO:0035195 )
response to water deprivation( GO:0009414 )
regulation of flavonoid biosynthetic process( GO:0009962 )
Trait Ontology drought tolerance( TO:0000276 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 10, 2022

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