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Basic Information
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CGSNL Gene Symbol
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MIR171E
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Gene Symbol Synonym
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miR171e, osa-miR171e, osa-miR171e-3p, osa-miR171e-5p
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CGSNL Gene Name
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MICRORNA171E
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Gene Name Synonym
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MICRORNA171e, osa-miRNA171e
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Protein Name
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_
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Allele
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Chromosome No.
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3
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Explanation
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miRBASE accession: MI0001136. target gene(s): GRAS transcription factors. AY551248. LM379342, LM383074. target gene(s): MSTRG.16012.6, Os02g0783700(OsLKR/SDH), Os05g0518600(OsTPS1).
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Trait Class
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Tolerance and resistance - Stress tolerance
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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-
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RAP ID
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-
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Links
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Li M., Li W., Zhao M., Li Z., Wang G.L., Liu W., Liang C.
BMC Genomics 2023 24(1) 643
Transcriptome analysis reveals a lncRNA-miRNA-mRNA regulatory network in OsRpp30-mediated disease resistance in rice.
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Devi S.J., Madhav M.S., Kumar G.R., Goel A.K., Umakanth B., Jahnavi B., Viraktamath B.C.
Gene 2013 531(1) 15-22
Identification of abiotic stress miRNA transcription factor binding motifs (TFBMs) in rice.
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Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011 23(12) 4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
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Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011 39 D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
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Li,Y., Li,W. and Jin,Y.X.
Acta Biochim. Biophys. Sin. (Shanghai) 2005 37 (2) 75-87
Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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gene silencing by miRNA( GO:0035195 )
mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
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Trait Ontology
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-
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Plant Ontology
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-
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Related Strains
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-
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Phenotype images
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-
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Last updated
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Dec 25, 2023
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Update info.