Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol MIR171E
Gene Symbol Synonym miR171e, osa-miR171eosa-miR171e-3p osa-miR171e-5p
CGSNL Gene Name MICRORNA171E
Gene Name Synonym MICRORNA171e, osa-miRNA171e
Protein Name _
Allele
Chromosome No. 3
Explanation miRBASE accession: MI0001136. target gene(s): GRAS transcription factors. AY551248.LM379342 LM383074
Trait Class Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Devi S.J., Madhav M.S., Kumar G.R., Goel A.K., Umakanth B., Jahnavi B., Viraktamath B.C.
Gene 2013  531(1)  15-22
Identification of abiotic stress miRNA transcription factor binding motifs (TFBMs) in rice.
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Li,Y., Li,W. and Jin,Y.X.
Acta Biochim. Biophys. Sin. (Shanghai) 2005  37 (2)  75-87
Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
TextPresso Search Search textpresso for MIR171E ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology gene silencing by miRNA( GO:0035195 )
mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 4, 2014


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