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Basic Information
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CGSNL Gene Symbol
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MIR166N
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Gene Symbol Synonym
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miR166n, osa-miR166n, osa-MIR166n, miR166j, osa-miR166j, osa-MIR166j, osa-miR166j-3p, osa-miR166j-5p
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CGSNL Gene Name
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MICRORNA166N
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Gene Name Synonym
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MICRORNA166n, osa-miRNA166n, MICRORNA166j, osa-miRNA166j
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Protein Name
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_
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Allele
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Chromosome No.
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3
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Explanation
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miRBASE accession: MI0001158 (osa-MIR166j, Previous IDs: osa-miR166n). AY551229. HM139434-HM139443 . LM379361, LM383081. osa-MIR166n in Li et al. 2005, Wang et al. 2010, Jeong et al. 2011, Zhai et al. 2013. osa-miR166j in Kozomara and Griffiths-Jones 2011.
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Trait Class
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Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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-
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RAP ID
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-
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Links
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Zhao W., Xiao W., Sun J., Chen M., Ma M., Cao Y., Cen W., Li R., Luo J.
Plants (Basel) 2022 11(7)
An Integration of MicroRNA and Transcriptome Sequencing Analysis Reveal Regulatory Roles of miRNAs in Response to Chilling Stress in Wild Rice.
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Mahesh H.B., Shirke M.D., Wang G.L., Gowda M.
Genomics 2021 113(1 Pt 1) 265-275
In planta transcriptome analysis reveals tissue-specific expression of pathogenicity genes and microRNAs during rice-Magnaporthe interactions.
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Zhang D., Liu M., Tang M., Dong B., Wu D., Zhang Z., Zhou B.
Plant Sci. 2015 237 24-32
Repression of microRNA biogenesis by silencing of OsDCL1 activates the basal resistance to Magnaporthe oryzae in rice.
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Zhai J., Zhao Y., Simon S.A., Huang S., Petsch K., Arikit S., Pillay M., Ji L., Xie M., Cao X., Yu B., Timmermans M., Yang B., Chen X., Meyers B.C.
Plant Cell 2013 25(7) 2417-28
Plant MicroRNAs Display Differential 3' Truncation and Tailing Modifications That Are ARGONAUTE1 Dependent and Conserved Across Species.
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Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011 39 D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
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Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011 23(12) 4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
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Wang,Y., Shen,D., Bo,S., Chen,H., Zheng,J., Zhu,Q.H., Cai,D., Helliwell,C. and Fan,L.
BMC Evol. Biol. 2010 10 119
Sequence variation and selection of small RNAs in domesticated rice
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Li,Y., Li,W. and Jin,Y.X.
Acta Biochim. Biophys. Sin. (Shanghai) 2005 37 (2) 75-87
Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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gene silencing by miRNA( GO:0035195 )
mRNA cleavage( GO:0006379 )
micro-ribonucleoprotein complex( GO:0035068 )
RNA-induced silencing complex( GO:0016442 )
defense response to fungus( GO:0050832 )
response to cold( GO:0009409 )
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Trait Ontology
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blast disease( TO:0000074 )
cold tolerance( TO:0000303 )
leaf blast disease resistance( TO:0000468 )
panicle blast disease resistance( TO:0000477 )
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Feb 16, 2023
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Update info.