Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol MIR166L
Gene Symbol Synonym miR166l, osa-miR166losa-miR166l-3p osa-miR166l-5p
CGSNL Gene Name MICRORNA166L
Gene Name Synonym MICRORNA166l, osa-miRNA166l
Protein Name _
Allele
Chromosome No. 9
Explanation miRBASE accession: MI0001108. AY551232. HM139411-HM139421. LM379320, LM383066. target gene(s): MSTRG.24461.2, Os12g0281300 (Pita).
Trait Class Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Li M., Li W., Zhao M., Li Z., Wang G.L., Liu W., Liang C.
BMC Genomics 2023  24(1)  643
Transcriptome analysis reveals a lncRNA-miRNA-mRNA regulatory network in OsRpp30-mediated disease resistance in rice.
Zhao W., Xiao W., Sun J., Chen M., Ma M., Cao Y., Cen W., Li R., Luo J.
Plants (Basel) 2022  11(7) 
An Integration of MicroRNA and Transcriptome Sequencing Analysis Reveal Regulatory Roles of miRNAs in Response to Chilling Stress in Wild Rice.
Mahesh H.B., Shirke M.D., Wang G.L., Gowda M.
Genomics 2021  113(1 Pt 1)  265-275
In planta transcriptome analysis reveals tissue-specific expression of pathogenicity genes and microRNAs during rice-Magnaporthe interactions.
Zhai J., Zhao Y., Simon S.A., Huang S., Petsch K., Arikit S., Pillay M., Ji L., Xie M., Cao X., Yu B., Timmermans M., Yang B., Chen X., Meyers B.C.
Plant Cell 2013  25(7)  2417-28
Plant MicroRNAs Display Differential 3' Truncation and Tailing Modifications That Are ARGONAUTE1 Dependent and Conserved Across Species.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Wang,Y., Shen,D., Bo,S., Chen,H., Zheng,J., Zhu,Q.H., Cai,D., Helliwell,C. and Fan,L.
BMC Evol. Biol. 2010  10  119
Sequence variation and selection of small RNAs in domesticated rice
Li,Y., Li,W. and Jin,Y.X.
Acta Biochim. Biophys. Sin. (Shanghai) 2005  37 (2)  75-87
Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
DB Reference
Gramene ID -
Ontologies
Gene Ontology gene silencing by miRNA( GO:0035195 )
response to cold( GO:0009409 )
RNA-induced silencing complex( GO:0016442 )
mRNA cleavage( GO:0006379 )
micro-ribonucleoprotein complex( GO:0035068 )
defense response to fungus( GO:0050832 )
Trait Ontology cold tolerance( TO:0000303 )
panicle blast disease resistance( TO:0000477 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Dec 25, 2023

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