Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol MIR166D
Gene Symbol Synonym miR166d, osa-miR166dosa-miR166d-3p osa-miR166d-5p
CGSNL Gene Name MICRORNA166D
Gene Name Synonym MICRORNA166d, osa-miRNA166d
Protein Name _
Allele
Chromosome No. 2
Explanation miRBASE accession: MI0000673. HM139361-HM139367.LM379160 LM383055
Trait Class Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version)
-
Map
Locate(cM)
Link map Classical linkage map
References
Zhang D., Liu M., Tang M., Dong B., Wu D., Zhang Z., Zhou B.
Plant Sci. 2015  237  24-32
Repression of microRNA biogenesis by silencing of OsDCL1 activates the basal resistance to Magnaporthe oryzae in rice.
Mondal T.K., Ganie S.A.
Gene 2014  535  204-209
Identification and characterization of salt responsive miRNA-SSR markers in rice (oryza sativa)
Zhai J., Zhao Y., Simon S.A., Huang S., Petsch K., Arikit S., Pillay M., Ji L., Xie M., Cao X., Yu B., Timmermans M., Yang B., Chen X., Meyers B.C.
Plant Cell 2013  25(7)  2417-28
Plant MicroRNAs Display Differential 3' Truncation and Tailing Modifications That Are ARGONAUTE1 Dependent and Conserved Across Species.
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Wang,Y., Shen,D., Bo,S., Chen,H., Zheng,J., Zhu,Q.H., Cai,D., Helliwell,C. and Fan,L.
BMC Evol. Biol. 2010  10  119
Sequence variation and selection of small RNAs in domesticated rice
TextPresso Search Search textpresso for MIR166D ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology gene silencing by miRNA( GO:0035195 )
mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
defense response to fungus( GO:0050832 )
Trait Ontology salt sensitivity( TO:0000429 )
blast disease( TO:0000074 )
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Oct 8, 2015


Login ID
Password
/rice/oryzabase