|
Basic Information
|
|
CGSNL Gene Symbol
|
MIR164C
|
|
Gene Symbol Synonym
|
miR164c, osa-miR164c
|
|
CGSNL Gene Name
|
MICRORNA164C
|
|
Gene Name Synonym
|
MICRORNA164c, osa-miRNA164c
|
|
Protein Name
|
_
|
|
Allele
|
|
|
Chromosome No.
|
5
|
|
Explanation
|
miRBASE accession: MI0001103. AY551226. HM139198-HM139240 (O. sativa, O. rufipogon, O. barthii). LM379316. GO:0090559: regulation of membrane permeability. TO:0000748: leaf morphology trait. GO:1902182: shoot apical meristem development. TO:0006064: rolled leaf. GO:0090470: shoot organ boundary specification.
|
|
Trait Class
|
Vegetative organ - Leaf
Vegetative organ - Culm
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Seed - Physiological traits
Reproductive organ - Spikelet, flower, glume, awn
Other
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
-
|
|
MSU ID
|
-
|
|
RAP ID
|
-
|
|
Links
|
-
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Zhou S., Huang K., Zhou Y., Hu Y., Xiao Y., Chen T., Yin M., Liu Y., Xu M., Jiang X.
BMC Plant Biol. 2022 22(1) 269
Degradome sequencing reveals an integrative miRNA-mediated gene interaction network regulating rice seed vigor.
|
|
Wang J., Bao J., Zhou B., Li M., Li X., Jin J.
New Phytol. 2020
The osa-miR164 target OsCUC1 functions redundantly with OsCUC3 in controlling rice meristem/organ boundary specification.
|
|
Zhou Y., Zhou S., Wang L., Wu D., Cheng H., Du X., Mao D., Zhang C., Jiang X.
J Integr Plant Biol 2019
miR164c and miR168a regulate seed vigor in rice.
|
|
Fang Y., Xie K., Xiong L.
J. Exp. Bot. 2014 65(8) 2119-35
Conserved miR164-targeted NAC genes negatively regulate drought resistance in rice.
|
|
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011 39 D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
|
|
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011 23(12) 4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
|
|
Wang,Y., Shen,D., Bo,S., Chen,H., Zheng,J., Zhu,Q.H., Cai,D., Helliwell,C. and Fan,L.
BMC Evol. Biol. 2010 10 119
Sequence variation and selection of small RNAs in domesticated rice
|
|
Li,Y., Li,W. and Jin,Y.X.
Acta Biochim. Biophys. Sin. (Shanghai) 2005 37 (2) 75-87
Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
gene silencing by miRNA( GO:0035195 )
micro-ribonucleoprotein complex( GO:0035068 )
mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
leaf development( GO:0048366 )
organ boundary specification between lateral organs and the meristem( GO:0010199 )
|
|
Trait Ontology
|
seed viability( TO:0000345 )
germination ratio( TO:0000202 )
stamen number( TO:0000225 )
plant height( TO:0000207 )
male sterility( TO:0000437 )
leaf development trait( TO:0000655 )
germination rate( TO:0000430 )
|
|
Plant Ontology
|
leaf development stage( PO:0001050 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Sep 15, 2022
|
Update info.