|
Basic Information
|
|
CGSNL Gene Symbol
|
MIR319B
|
|
Gene Symbol Synonym
|
OsmiR319b, Osa-miR319b
|
|
CGSNL Gene Name
|
MICRORNA319B
|
|
Gene Name Synonym
|
rice microRNA319b, MicroRNA319b
|
|
Protein Name
|
|
|
Allele
|
|
|
Chromosome No.
|
1
|
|
Explanation
|
miRBASE accession: MI0001099. predicted target(s): HEAT repeat family. AY551258. LM379312. TO:0000820: leaf vein morphology trait. Os01g0222001 (AK241923, protein-coding in RapDB) in Yang et al. 2013. GO:1900366: negative regulation of defense response to insect.
|
|
Trait Class
|
Vegetative organ - Leaf
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Other
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
-
|
|
MSU ID
|
-
|
|
RAP ID
|
-
|
|
Links
|
-
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Sun B., Shen Y., Zhu L., Yang X., Liu X., Li D., Zhu M., Miao X., Shi Z.
BMC Biol. 2024 22(1) 68
OsmiR319-OsPCF5 modulate resistance to brown planthopper in rice through association with MYB proteins.
|
|
Huo C., Zhang B., Wang R.
Plant Signal Behav 2022 17(1) 2004035
Research progress on plant noncoding RNAs in response to low-temperature stress.
|
|
Zhao W., Xiao W., Sun J., Chen M., Ma M., Cao Y., Cen W., Li R., Luo J.
Plants (Basel) 2022 11(7)
An Integration of MicroRNA and Transcriptome Sequencing Analysis Reveal Regulatory Roles of miRNAs in Response to Chilling Stress in Wild Rice.
|
|
Xu P., Ali A., Han B., Wu X.
Front Plant Sci 2018 9 1528
Current Advances in Molecular Basis and Mechanisms Regulating Leaf Morphology in Rice.
|
|
Wang S.T., Sun X.L., Hoshino Y., Yu Y., Jia B., Sun Z.W., Sun M.Z., Duan X.B., Zhu Y.M.
PLoS ONE 2014 9(3) e91357
MicroRNA319 Positively Regulates Cold Tolerance by Targeting OsPCF6 and OsTCP21 in Rice (Oryza sativa L.).
|
|
Yang C., Li D., Mao D., Liu X., Ji C., Li X., Zhao X., Cheng Z., Chen C., Zhu L.
Plant Cell Environ. 2013 36(12) 2207-18
Overexpression of microRNA319 impacts leaf morphogenesis and leads to enhanced cold tolerance in rice (Oryza sativa L.).
|
|
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011 39 D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
|
|
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011 23(12) 4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
|
|
Li,Y., Li,W. and Jin,Y.X.
Acta Biochim. Biophys. Sin. (Shanghai) 2005 37 (2) 75-87
Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
gene silencing by miRNA( GO:0035195 )
response to cold( GO:0009409 )
leaf morphogenesis( GO:0009965 )
micro-ribonucleoprotein complex( GO:0035068 )
defense response to insect( GO:0002213 )
|
|
Trait Ontology
|
leaf width( TO:0000370 )
cold tolerance( TO:0000303 )
proline content( TO:0006002 )
brown planthopper resistance( TO:0000424 )
|
|
Plant Ontology
|
-
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Sep 6, 2024
|
Update info.