Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol MIR156K
Gene Symbol Synonym miR156k, OsmiR156k, osmiR156k, osa-miR156k, osa-MIR156k
CGSNL Gene Name MICRORNA156K
Gene Name Synonym micro RNA 156k, microRNA156k, osa-miRNA156k
Protein Name
Allele
Chromosome No. 9
Explanation miRBASE accession: MI0001090. target gene(s): SPL (Squamosa Promoter binding protein Like) gene family. AY551211. LM379303.
Trait Class Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version)
-
Map
Locate(cM)
Link map Classical linkage map
References
Devi S.J., Madhav M.S., Kumar G.R., Goel A.K., Umakanth B., Jahnavi B., Viraktamath B.C.
Gene 2013  531(1)  15-22
Identification of abiotic stress miRNA transcription factor binding motifs (TFBMs) in rice.
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Ding Y., Chen Z., Zhu C.
J. Exp. Bot. 2011  62(10)  3563-73
Microarray-based analysis of cadmium-responsive microRNAs in rice (Oryza sativa).
Wang S,Zhu QH,Guo X,Gui Y,Bao J,Helliwell C,Fan L
FEBS Lett. 2007  581  4789-93
Molecular evolution and selection of a gene encoding two tandem microRNAs in rice.
Xie K, Wu C, Xiong L.
Plant Physiol. 2006  142(1)  280-293
Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.
Li,Y., Li,W. and Jin,Y.X.
Acta Biochim. Biophys. Sin. (Shanghai) 2005  37 (2)  75-87
Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
TextPresso Search Search textpresso for MIR156K ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology mRNA cleavage( GO:0006379 )
micro-ribonucleoprotein complex( GO:0035068 )
gene silencing by miRNA( GO:0035195 )
RNA-induced silencing complex( GO:0016442 )
response to cadmium ion( GO:0046686 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 20, 2015


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Password
/rice/oryzabase