Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol MIR156F
Gene Symbol Synonym miR156f, osmiR156f, OsmiR156f, osa-miR156f, osa-MIR156fosa-miR156f-3p osa-miR156f-5p
CGSNL Gene Name MICRORNA156F
Gene Name Synonym micro RNA 156f, microRNA156f, osa-miRNA156f
Protein Name
Allele
Chromosome No. 8
Explanation miRBase accession: MI0000658. target gene(s): SPL (Squamosa Promoter binding protein Like) gene family. OsmiR156f may specifically regulate OsSPL3, OsSPL12, and OsSPL14 in the young culms (Liu et al. 2015).LM383045 LM379146
Trait Class Vegetative organ - Culm
Tolerance and resistance - Disease resistance
Character as QTL - Yield and productivity
Other
Expression
Sequence/Locus
cDNA Accession No. -
RAP ID -
Links -
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Dai Z., Wang J., Yang X., Lu H., Miao X., Shi Z.
J. Exp. Bot. 2018  69(21)  5117-5130
Modulation of plant architecture by the miR156f-OsSPL7-OsGH3.8 pathway in rice.
Zhang D., Liu M., Tang M., Dong B., Wu D., Zhang Z., Zhou B.
Plant Sci. 2015  237  24-32
Repression of microRNA biogenesis by silencing of OsDCL1 activates the basal resistance to Magnaporthe oryzae in rice.
Liu Q., Shen G., Peng K., Huang Z., Tong J., Kabir M.H., Wang J., Zhang J., Qin G., Xiao L.
J Integr Plant Biol 2015   
A T-DNA insertion mutant Osmtd1 was altered in architecture by upregulating MicroRNA156f in rice.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Wang S,Zhu QH,Guo X,Gui Y,Bao J,Helliwell C,Fan L
FEBS Lett. 2007  581  4789-93
Molecular evolution and selection of a gene encoding two tandem microRNAs in rice.
Xie K, Wu C, Xiong L.
Plant Physiol. 2006  142(1)  280-293
Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.
TextPresso Search Search textpresso for MIR156F ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
gene silencing by miRNA( GO:0035195 )
defense response to fungus( GO:0050832 )
Trait Ontology tiller number( TO:0000346 )
plant height( TO:0000207 )
blast disease( TO:0000074 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Apr 18, 2019


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