Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol MIR156E
Gene Symbol Synonym miR156e, OsmiR156e, osmiR156e, osa-miR156e, osa-MIR156e
CGSNL Gene Name MICRORNA156E
Gene Name Synonym micro RNA 156e, microRNA156e, osa-miRNA156e
Protein Name
Allele
Chromosome No. 4
Explanation miRBase accession: MI0000657. target gene(s): SPL (Squamosa Promoter binding protein Like) gene family. GO: 1901600: strigolactone metabolic process.LM379145
Trait Class Tolerance and resistance - Disease resistance
Character as QTL - Yield and productivity
Other
Expression
Sequence/Locus
cDNA Accession No. -
RAP ID -
Links -
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Chen Z., Gao X., Zhang J.
Plant Cell Rep. 2015  34(5)  767-81
Alteration of osa-miR156e expression affects rice plant architecture and strigolactones (SLs) pathway.
Zhang D., Liu M., Tang M., Dong B., Wu D., Zhang Z., Zhou B.
Plant Sci. 2015  237  24-32
Repression of microRNA biogenesis by silencing of OsDCL1 activates the basal resistance to Magnaporthe oryzae in rice.
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Wang S,Zhu QH,Guo X,Gui Y,Bao J,Helliwell C,Fan L
FEBS Lett. 2007  581  4789-93
Molecular evolution and selection of a gene encoding two tandem microRNAs in rice.
Xie K, Wu C, Xiong L.
Plant Physiol. 2006  142(1)  280-293
Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.
TextPresso Search Search textpresso for MIR156E ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
gene silencing by miRNA( GO:0035195 )
micro-ribonucleoprotein complex( GO:0035068 )
defense response to fungus( GO:0050832 )
Trait Ontology tillering ability( TO:0000329 )
tiller number( TO:0000346 )
plant height( TO:0000207 )
panicle size( TO:0006032 )
leaf size( TO:0002637 )
stem length( TO:0000576 )
blast disease( TO:0000074 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 8, 2015


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