Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol FC24
Gene Symbol Synonym OsUGE2, UGE2, OsFC24, BZ1, OsBZ1
CGSNL Gene Name FRAGILE CULM 24
Gene Name Synonym UDP-glucose epimerase 2, fragile culm 24, brittle stem and zebra leaf 1
Protein Name UDP-GLUCOSE EPIMERASE 2
Allele Osfc24, bz1
Chromosome No. 8
Explanation Q6ZDJ7. TO:0000993: cellulose content. GO:0052574: UDP-galactose biosynthetic process.
Trait Class Biochemical character
Vegetative organ - Leaf
Vegetative organ - Culm
Coloration - Chlorophyll
Character as QTL - Yield and productivity
Expression
Sequence/Locus
cDNA Accession No. AK066269
MSU ID LOC_Os08g28730.1
RAP ID Os08g0374800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Zhang R., Hu H., Wang Y., Hu Z., Ren S., Li J., He B., Wang Y., Xia T., Chen P., Xie G., Peng L.
J. Exp. Bot. 2020   
A novel rice fragile culm 24 mutant encodes a UDP-glucose epimerase that affects cell wall property and photosynthesis.
Liu S., Tang Y., Ruan N., Dang Z., Huang Y., Miao W., Xu Z., Li F.
Rice (N Y) 2020  13(1)  41
The Rice bz1 Locus Is Required for Glycosylation of Arabinogalactan Proteins and Galactolipid and Plays a Role in both Mechanical Strength and Leaf Color.
Li C., Wang Y., Liu L., Hu Y., Zhang F., Mergen S., Wang G., Schläppi MR., Chu C.
PLoS Genet. 2011  7(7)  e1002196
A rice plastidial nucleotide sugar epimerase is involved in galactolipid biosynthesis and improves photosynthetic efficiency.
TextPresso Search Search textpresso for FC24 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology plant-type cell wall organization( GO:0009664 )
cellulose microfibril organization( GO:0010215 )
chloroplast organization( GO:0009658 )
arabinogalactan protein metabolic process( GO:0010405 )
coenzyme binding( GO:0050662 )
cell wall biogenesis( GO:0042546 )
root epidermal cell differentiation( GO:0010053 )
xyloglucan biosynthetic process( GO:0009969 )
response to stress( GO:0006950 )
galactose metabolic process( GO:0006012 )
UDP-glucose 4-epimerase activity( GO:0003978 )
Golgi stack( GO:0005795 )
cytosol( GO:0005829 )
Trait Ontology stem strength( TO:0000051 )
leaf color( TO:0000326 )
chloroplast development trait( TO:0002715 )
lignin content( TO:0000731 )
plant height( TO:0000207 )
panicle size( TO:0006032 )
tiller number( TO:0000346 )
grain weight( TO:0000590 )
total biomass yield( TO:0000457 )
grain yield( TO:0000396 )
chlorophyll content( TO:0000495 )
photosynthetic ability( TO:0000316 )
Plant Ontology leaf( PO:0025034 )
stem( PO:0009047 )
Related Strains
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Phenotype images
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Last updated
Sep 14, 2020


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