Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol FC24
Gene Symbol Synonym OsUGE2, UGE2, OsFC24, BZ1, OsBZ1, OsBP1, BP1
CGSNL Gene Name FRAGILE CULM 24
Gene Name Synonym UDP-glucose epimerase 2, fragile culm 24, brittle stem and zebra leaf 1, BRITTLE PLANT1
Protein Name UDP-GLUCOSE EPIMERASE 2
Allele Osfc24, bz1, bp1
Chromosome No. 8
Explanation Q6ZDJ7. TO:0000993: cellulose content. GO:0052574: UDP-galactose biosynthetic process. TO:0000748: leaf morphology trait. PO:0030123: panicle inflorescence. TO:0000993: cellulose content. GO:2000377: regulation of reactive oxygen species metabolic process. TO:0020089: iron content trait. GO:2000280: regulation of root development. GO:0071588: hydrogen peroxide mediated signaling pathway.
Trait Class Biochemical character
Vegetative organ - Leaf
Vegetative organ - Culm
Vegetative organ - Root
Coloration - Chlorophyll
Character as QTL - Yield and productivity
Character as QTL - Plant growth activity
Expression
Sequence/Locus
cDNA Accession No. AK066269
MSU ID LOC_Os08g28730.1
RAP ID Os08g0374800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Yang S., Chen N., Qi J., Salam A., Khan A.R., Azhar W., Yang C., Xu N., Wu J., Liu Y., Liu B., Gan Y.
Rice (N Y) 2024  17(1)  6
OsUGE2 Regulates Plant Growth through Affecting ROS Homeostasis and Iron Level in Rice.
Zhang Y., Wang Y., Wang C., Rautengarten C., Duan E., Zhu J., Zhu X., Lei J., Peng C., Wang Y., Teng X., Tian Y., Liu X., Heazlewood J.L., Wu A., Wan J.
J Integr Plant Biol 2021  63(5)  865-877
BRITTLE PLANT1 is required for normal cell wall composition and mechanical strength in rice.
Zhang R., Hu H., Wang Y., Hu Z., Ren S., Li J., He B., Wang Y., Xia T., Chen P., Xie G., Peng L.
J. Exp. Bot. 2020   
A novel rice fragile culm 24 mutant encodes a UDP-glucose epimerase that affects cell wall property and photosynthesis.
Liu S., Tang Y., Ruan N., Dang Z., Huang Y., Miao W., Xu Z., Li F.
Rice (N Y) 2020  13(1)  41
The Rice bz1 Locus Is Required for Glycosylation of Arabinogalactan Proteins and Galactolipid and Plays a Role in both Mechanical Strength and Leaf Color.
Li C., Wang Y., Liu L., Hu Y., Zhang F., Mergen S., Wang G., Schläppi MR., Chu C.
PLoS Genet. 2011  7(7)  e1002196
A rice plastidial nucleotide sugar epimerase is involved in galactolipid biosynthesis and improves photosynthetic efficiency.
DB Reference
Gramene ID -
Ontologies
Gene Ontology UDP-glucose 4-epimerase activity( GO:0003978 )
Golgi stack( GO:0005795 )
cytosol( GO:0005829 )
plant-type cell wall organization( GO:0009664 )
cellulose microfibril organization( GO:0010215 )
chloroplast organization( GO:0009658 )
arabinogalactan protein metabolic process( GO:0010405 )
coenzyme binding( GO:0050662 )
cell wall biogenesis( GO:0042546 )
root epidermal cell differentiation( GO:0010053 )
xyloglucan biosynthetic process( GO:0009969 )
galactose metabolic process( GO:0006012 )
response to stress( GO:0006950 )
cellular response to iron ion starvation( GO:0010106 )
response to starvation( GO:0042594 )
response to hydrogen peroxide( GO:0042542 )
positive regulation of unidimensional cell growth( GO:0051512 )
root development( GO:0048364 )
iron ion transport( GO:0006826 )
plasma membrane( GO:0005886 )
nucleus( GO:0005634 )
endoplasmic reticulum( GO:0005783 )
multicellular organismal iron ion homeostasis( GO:0060586 )
Trait Ontology stem strength( TO:0000051 )
leaf color( TO:0000326 )
chloroplast development trait( TO:0002715 )
lignin content( TO:0000731 )
plant height( TO:0000207 )
panicle size( TO:0006032 )
tiller number( TO:0000346 )
grain weight( TO:0000590 )
total biomass yield( TO:0000457 )
brittle culm( TO:0000200 )
sugar content( TO:0000333 )
monosaccharide content( TO:0006006 )
glucose content( TO:0000300 )
grain yield( TO:0000396 )
chlorophyll content( TO:0000495 )
photosynthetic ability( TO:0000316 )
growth and development trait( TO:0000357 )
root length( TO:0000227 )
root number( TO:0000084 )
root development trait( TO:0000656 )
iron sensitivity( TO:0000224 )
panicle length( TO:0000040 )
filled grain number( TO:0000447 )
1000-seed weight( TO:0000382 )
seedling height( TO:0000019 )
root fresh weight( TO:0000578 )
shoot fresh weight( TO:0000571 )
chlorophyll-a content( TO:0000293 )
chlorophyll-b content( TO:0000295 )
Plant Ontology leaf( PO:0025034 )
stem( PO:0009047 )
leaf sheath( PO:0020104 )
inflorescence( PO:0009049 )
root( PO:0009005 )
seedling development stage( PO:0007131 )
2 formation of axillary shoot stage( PO:0007073 )
root development stage( PO:0007520 )
Related Strains
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Phenotype images
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Last updated
Jun 17, 2024

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