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Basic Information
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CGSNL 遺伝子シンボル
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PHD1
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遺伝子シンボルシノニム
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OsPHD1, LM212-1
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CGSNL 遺伝子名
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PHOTOASSIMILATE DEFECTIVE 1
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遺伝子名シノニム
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photoassimilate defective1, photoassimilate defective 1, lesion mimic 212-1
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タンパク質名
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対立遺伝子
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phd1, phd1-1, phd1-2, phd1-3, lm212-1
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染色体番号
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1
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解説
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PHD1 encodes a functional chloroplast-localized UDP-glucose epimerase (UGE). PO:0030123: panicle inflorescence. GO:0140426: PAMP-triggered immunity signalling pathway. GO:2000377: regulation of reactive oxygen species metabolic process.
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形質クラス
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生化学的性質
栄養器官 - 葉
着色 - 葉緑素
耐性、抵抗性 - 病気抵抗性
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発現
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Sequence/Locus
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cDNA Accession No.
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AK119785
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MSU ID
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LOC_Os01g26920.1
LOC_Os01g26920.2
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RAP ID
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Os01g0367100
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Gao Y., Xiang X., Zhang Y., Cao Y., Wang B., Zhang Y., Wang C., Jiang M., Duan W., Chen D., Zhan X., Cheng S., Liu Q., Cao L.
Int J Mol Sci 2022 23(2)
Disruption of <i>OsPHD1</i>, Encoding a UDP-glucose epimerase, Causes JA Accumulation and Enhanced Bacterial Blight Resistance in Rice.
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Zhang R., Hu H., Wang Y., Hu Z., Ren S., Li J., He B., Wang Y., Xia T., Chen P., Xie G., Peng L.
J. Exp. Bot. 2020
A novel rice fragile culm 24 mutant encodes a UDP-glucose epimerase that affects cell wall property and photosynthesis.
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Gao D., Sun W., Wang D., Dong H., Zhang R., Yu S.
Sci Rep 2020 10(1) 3726
A xylan glucuronosyltransferase gene exhibits pleiotropic effects on cellular composition and leaf development in rice.
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Liu S., Tang Y., Ruan N., Dang Z., Huang Y., Miao W., Xu Z., Li F.
Rice (N Y) 2020 13(1) 41
The Rice bz1 Locus Is Required for Glycosylation of Arabinogalactan Proteins and Galactolipid and Plays a Role in both Mechanical Strength and Leaf Color.
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Abbai R., Singh V.K., Nachimuthu V.V., Sinha P., Selvaraj R., Vipparla A.K., Singh A.K., Singh U.M., Varshney R.K., Kumar A.
Plant Biotechnol. J. 2019
Haplotype analysis of key genes governing grain yield and quality traits across 3K RG panel reveals scope for the development of tailor-made rice with enhanced genetic gains.
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Li C., Wang Y., Liu L., Hu Y., Zhang F., Mergen S., Wang G., Schläppi MR., Chu C.
PLoS Genet. 2011 7(7) e1002196
A rice plastidial nucleotide sugar epimerase is involved in galactolipid biosynthesis and improves photosynthetic efficiency.
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TextPresso Search
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Search textpresso for PHD1
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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jasmonic acid mediated signaling pathway( GO:0009867 )
regulation of cell death( GO:0010941 )
response to chitin( GO:0010200 )
response to molecule of fungal origin( GO:0002238 )
response to molecule of bacterial origin( GO:0002237 )
defense response to bacterium( GO:0042742 )
chloroplast( GO:0009507 )
chloroplast organization( GO:0009658 )
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Trait Ontology
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chlorophyll content( TO:0000495 )
photosynthetic ability( TO:0000316 )
chloroplast development trait( TO:0002715 )
jasmonic acid content( TO:0002668 )
bacterial blight disease resistance( TO:0000175 )
fungal disease resistance( TO:0000439 )
mimic response( TO:0000063 )
hydrogen peroxide content( TO:0000605 )
carotenoid content( TO:0000496 )
chlorophyll-a content( TO:0000293 )
chlorophyll-b content( TO:0000295 )
leaf color( TO:0000326 )
net photosynthetic rate( TO:0001027 )
transpiration rate( TO:0001018 )
soluble protein content( TO:0000325 )
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Plant Ontology
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root( PO:0009005 )
stem( PO:0009047 )
leaf( PO:0025034 )
leaf sheath( PO:0020104 )
inflorescence( PO:0009049 )
stem internode( PO:0020142 )
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関連系統
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形質画像
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更新日
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2022-06-13 09:22:28.724
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更新情報
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